KEGG   Asparagus officinalis (garden asparagus): 109837722
Entry
109837722         CDS       T05243                                 
Name
(RefSeq) receptor homology region, transmembrane domain- and RING domain-containing protein 1
  KO
K15692  E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:aof04121]
    109837722
Enzymes [BR:aof01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109837722
Ubiquitin system [BR:aof04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    109837722
SSDB
Motif
Pfam: zf-RING_2 PA zf-RING_11 zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-rbx1 zf-RING_5 zf-C3HC4_3 zf-RING_4 Prok-RING_4 zf-ANAPC11 ID
Other DBs
NCBI-GeneID: 109837722
NCBI-ProteinID: XP_020261655
Position
4:complement(72498430..72506663)
AA seq 288 aa
MMNCSSKYSPLENLRLVLAVSSLFLFARSAALVNLRGKSFSFTFLDAPARFALKAGSGIC
GSLQLADPIEACSPLRNDNETGGGSSRFVLIARGDCSFEKKVRIAQDIGFEAAIIYDDQE
KSSLYSMIGDSTGIHMHAVFVSKMAGETLKKFARGEEGECCIGSSMDETAGTVLVISFVS
LVVIISVLAAFLFARNCRLLRHAARHSRPTTMNRQSVELLPCFTFKSAYVNSKRTADTCA
ICLEDYKDGERLRVLPCLHEFHSICVDSWLTKWGTFCPVCKHEMNSGE
NT seq 867 nt   +upstreamnt  +downstreamnt
atgatgaattgctcctcgaagtatagcccgctggaaaatttacgactggtcctcgccgtc
tcctcccttttcctcttcgcccgctccgccgccctcgtcaacctccgcggaaaatccttc
tccttcaccttcctcgacgcccccgctcgctttgccctaaaagctggatcgggtatttgc
gggtcccttcagcttgcggatccgattgaagcttgctctccccttcgaaacgataacgaa
actggtggagggagctcgaggtttgttttgatcgcgaggggagattgcagcttcgagaag
aaggtgaggattgctcaggatatagggtttgaggccgccattatctatgatgatcaagaa
aagagcagcctttactctatgatcggcgactcaactggcatccacatgcatgcagtattc
gtttcaaagatggccggggaaaccctgaagaagtttgctcgcggagaagaaggggaatgt
tgtataggttcatcaatggatgagactgctggaactgtgttggtaatttcttttgtctct
cttgtggtcataatatcagttctagcagcatttctctttgctcggaactgtcggcttctc
cggcatgcagcaagacacagccgtcctactacgatgaataggcagtctgtggaacttctt
ccttgcttcacatttaagagtgcctatgtaaatagcaagagaactgcagacacttgcgcc
atctgccttgaagattataaagatggagagagactgagagttcttccatgtctacatgag
tttcattcaatctgtgtcgactcctggttgacaaagtggggcactttttgcccagtttgc
aagcatgagatgaactcaggagagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (35)   

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