KEGG   Asparagus officinalis (garden asparagus): 109838993
Entry
109838993         CDS       T05243                                 
Name
(RefSeq) eukaryotic translation initiation factor 4G-like isoform X1
  KO
K03260  translation initiation factor 4G
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109838993
   03012 Translation factors [BR:aof03012]
    109838993
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     109838993
   mRNA cycle factors
    Stress granule specific factors
     109838993
Translation factors [BR:aof03012]
 Eukaryotic type
  Initiation factors
   eIF-4
    109838993
SSDB
Motif
Pfam: MIF4G MA3
Other DBs
NCBI-GeneID: 109838993
NCBI-ProteinID: XP_020263011
Position
4:complement(132045758..132063686)
AA seq 1690 aa
MSQNQTRGRSSNPRGFSGGRGRGRAQPPVSSNSSASRSLKKSGNGQSRATPIGTNQVPVS
SQGSSELRTSNAGSRPIPKAPSSQPSHSATPPKGGASRESFPLQFGSISPGIMNKMQIPA
RTSSAPPNLDEQKNAQAHHDSFRTKSTMPPPTALKEQQQQMRNDVTGLNQSSTRDSHPQS
QTNRDVHVPISLAPASIPPKSSVLPIGGMPMHLPFQQPQVPIQFGGPSPQMQPQGVTFNS
LQMPMALPIAQAPQQFFVPSIPSHPLQQPTMMHQGQGLGFAHQIGHQMPSQLGNLGFGIG
PQFSQPQPVTFVGTRRSTVKITHPDTHEELKLDMHKESKASNQKLQAVLTFSSSHQTNYH
STMQANSYNPSPILNPTSNSQMTTGSQGPRYRTPVGQNGQTILFSKQSVHNPISGNKPEQ
SLQVSAPPSVRVTIRPAVNSFEEKTGSIHQSKLQTQKEGGEVDQQPKSIEIASDTFSAED
EHSTTAPSSRISSSHLTPVGDSIQRSDSIKEQEGRTSKRAYHQQQNKPDVLDSEGMTKTI
SKSIKDSSDMIAQEKLEFLSLSNSSASITGLPFPAVQHENSAESKIKAVPSLSESYRVTL
EKEVSGDSSICSAVSLELATNRYLSEEGDSHEASTSLDSKAGRTISEISDSASNLHENTS
AETEKAHEDLALNGKSEVSADLQDSTSAGSYPVSTAPDSLETVNTTATRENEEIVVDKPE
EKASHVLCHGEEQPGTGQVVHCRLEVEMGEKKTDVLSSFSESKHTGYPLSSSHAAEDKPS
GPDSILNKFETESSQDSLQGSVSLGHKHKLDGEVTESSSREGLKDKPNLDPVRSKVNAGK
KKKLKDILSRADAAGSSDLYNAYKGPEEKNSVVDTSESIDDSLTVDAKNVLADDHNEDVL
DVEVGQITSEIDDWEDAADVSSPDLAVENIQQAHKNETTSKKSYTIDFLLTFSEQSADLP
VGFEIESDIANALMVSPVRTYPSPGRILDRSPYHGNDEKWTKAATGFGIGHDIRLNMGYA
VANISSRPAQGVNNLAVRHSRAHPSTHFASGILPGPMQPLSNADSDRWQRAIGAQRGFIP
SPHAPSQIMHKAANKYEIGKVSDIEQAKQRQLKAILNKLTPQNFEKLFLQVKEVNIDNTV
TLTGVISQIFDKALSEPTFCEMYANFCACLSNELPDFVEDNEKITFKRLLLNKCQEEFER
GEREEEAGRIEKEGESKQTAAQREEKRIKARRRMLGNIRLIGELYKKRMLTERIMHACIQ
KLLGEYQDPDEEDLESLCKLMSTIGAMIDHAKAKEHMDAYFDRISKLSTHPKLLPRTRFL
LRDTIDLRKNNWKERRKVEGPKKIDEVHRDAAHERQAQAGRLARGPVITSGPRRGPPADY
NLRGSALLSSPNSQQIGAARGLPTQFRGYTNQDTRADDRNHFESRVLSVPLPKRTTDDNS
ITLGPQGGLARGMSIRGESMLRDFRIDVNDKSASTNPSGRIHGSSSGIVETPSQSKFLSE
EDLREKSVSAIREFYSAKDEEEVALCIKELNSPSFYSSMISLWIADSFERKETERDLLAK
LLISLCKHQNSLFSHFQLIQGFEYVLSSLEDAVNDAPKAPEFLGHIFAKIALEDVVSLRD
IGKIIYEGGEEPGSLLESGLASEVLGCVLEFIKMAKGDSMLREICLNSNLKLEDFIPRHP
TKNNKLAAFL
NT seq 5073 nt   +upstreamnt  +downstreamnt
atgtcccaaaatcaaaccagaggccgatcgagcaatccgaggggattctccggcggaaga
ggccgagggcgcgctcagcctccagtctcatcaaattcatcagcgtctcggagtctcaag
aaatcaggcaatggacaatcgagggcaactcccattggcacgaatcaagtaccagtatct
tcacaaggatcatcggagttgcgcacctcaaatgcaggttcgagaccgattccgaaggct
ccatcttctcagccttctcactcagcaactccacctaaagggggtgcatcgcgagaatca
tttcctcttcagtttgggagtataagtccagggatcatgaacaagatgcagatacctgct
cggacgagttctgccccgccgaatttggatgagcagaagaatgcacaggctcatcatgat
tcgttcaggaccaaatccacaatgcctccacccactgctctaaaagagcaacagcagcag
atgaggaatgatgtgactggccttaatcaatctagcactcgagattctcatcctcaatcc
cagacaaacagggatgtacatgttcccatttcattggctcctgcttcaataccaccaaaa
tcttctgttcttcctataggtgggatgccaatgcacctcccctttcaacagcctcaagtt
cccattcaatttggtggtccaagcccacaaatgcaaccacaaggtgtcacattcaattca
ctacaaatgccgatggcattacctattgcccaagctcctcagcagttttttgttcccagt
atcccgtctcatccactgcaacaaccgaccatgatgcatcaggggcagggcttaggcttt
gcacatcaaataggtcaccaaatgccttctcagttaggcaacctcgggtttgggattggc
ccacaattttctcagccacagcctgtaacttttgttggtacaaggaggagcaccgtgaag
ataactcatccagatacacatgaagagttgaagcttgatatgcataaagagagtaaggca
tccaatcaaaagctgcaagccgttctgacttttagttcctctcatcaaacaaactaccat
tctaccatgcaagctaattcttataacccttcaccaattttaaaccccacatctaattct
caaatgactacaggttcacaaggtccccgatatagaactcctgttggtcaaaatgggcaa
accattttgttcagtaagcaatctgtccataatcccatatcaggcaacaaacctgagcaa
tcattgcaagtttctgctcctccttctgtccgtgtgacaattagaccagctgtcaattca
tttgaggagaaaactggatcaatacaccaaagtaagttgcaaactcagaaagagggtggt
gaagttgatcagcagcccaaatcaattgaaatagcaagtgatactttttcagctgaagat
gaacattccaccacagcaccatcttctagaatatcttcatcacatttgactccagttgga
gattctattcagagatcagactccataaaggaacaggagggaagaactagtaaaagagca
tatcatcagcaacaaaataagccagatgtactagattctgaaggaatgacaaaaacaatc
tcgaagtcaatcaaagatagcagtgacatgattgctcaggagaagcttgagttcctttca
ctgtcaaattcttctgcttctatcactggtttgccttttccagctgtacaacatgaaaat
tctgcagaatccaagattaaagcagtgccttcactttccgagtcatatagagttacactg
gaaaaggaagtatcaggagattcttctatttgttctgctgtttcactggagttggcaacc
aaccgctatttgtctgaggagggagattcacatgaggcatcaacttctttggattctaag
gctgggagaactatatctgaaatttctgattccgcatcaaatttacatgagaatacatct
gctgaaactgaaaaagcacatgaagatttagctttgaatggcaaatctgaagtatctgct
gatttacaagatagcacaagtgctggatcatatccagtttccacagcacctgattctctt
gaaactgttaatacaactgcaactagggaaaatgaagaaattgtagttgataagcctgaa
gaaaaagctagtcatgtattatgtcatggtgaagagcagccagggactggacaggtggtg
cactgcaggctagaggttgaaatgggagaaaagaagacagatgttctttcttcattttct
gagtctaaacataccggatatcctttatcatcttctcatgccgctgaagataaaccttca
ggccctgatagtattttaaataaatttgaaacggaaagcagccaggattctctacaaggt
tcagtttccttggggcataaacataaattggacggtgaagttacagaatcgtccagtagg
gagggactcaaagacaagcctaatttggatcctgtaagaagtaaggttaatgctggaaaa
aagaagaaattaaaggacattctctctagggcagatgctgcagggagttcagacctttat
aatgcatacaagggcccagaggaaaaaaattcagtagttgatacatcagaaagcattgat
gattctttaacagttgatgcaaagaatgtgcttgcagatgaccataatgaagatgttctt
gatgtagaagttgggcagattacatctgagattgatgattgggaagatgccgctgatgtc
tcttctccagatttagcggtggagaacatacagcaggctcataaaaatgaaactactagt
aaaaagagctacaccatcgattttctgttgaccttttctgagcaatctgcagatcttcct
gtaggctttgagatagaatctgacatagcaaatgctttaatggttagtccagtcaggaca
tatcccagcccaggaagaatcctggatagatctccttatcatggaaatgatgagaagtgg
accaaagcagctactggttttggtattgggcatgacattcgattaaatatgggttatgcg
gttgccaatataagttctcgaccagctcaaggagttaataatctggctgtcaggcattca
cgtgctcatccatccactcactttgctagtgggattctccctgggcctatgcaacctctg
tctaatgctgattcagacaggtggcagcgtgctattggtgctcaaagaggttttatacct
tctcctcatgcaccgtctcaaataatgcataaggctgcaaataagtatgaaataggtaag
gtgtctgacatagaacaggcaaagcaaaggcagctgaaagctatacttaacaagttgaca
cctcagaattttgagaaactctttttacaagttaaagaggttaacatcgacaacacagtt
actcttactggggtcatttcccagatttttgataaagccttgtcggagccaaccttttgt
gagatgtatgcaaatttctgtgcctgcctttctaatgaattaccagatttcgtcgaggac
aatgaaaaaattacctttaaaaggttgcttctcaacaagtgccaagaagaatttgaaaga
ggtgagagagaggaggaagcgggcagaatagaaaaggaaggtgaaagcaaacaaactgca
gcacaaagagaagagaaacgaatcaaggcacgacgacggatgcttggaaatattcgtctg
ataggagaattatacaaaaagagaatgctgacagagaggatcatgcatgcatgtatacaa
aaattgctgggagaatatcaggatcctgatgaggaggatcttgaatctttgtgtaagttg
atgagcacaataggggccatgatagatcatgccaaggccaaggaacatatggatgcatat
tttgacaggatctcaaaactttctacccatccgaagctattacctcgaactagattcttg
ctaagggacacaattgatcttagaaagaataattggaaagagagaagaaaagttgaaggg
ccaaagaagattgatgaggttcacagagatgcagcacatgagcggcaagctcaagctggc
agattggctcgtggccctgtcattacttctggaccaagacgaggacctcctgctgattat
aacctgagaggatctgctttgctatcttctccaaattctcagcaaattggcgctgctcgt
ggtttacctactcagttccgtgggtataccaatcaagatactcgagcggatgacagaaat
cactttgagagtagggtgctatctgttcccctcccgaaaaggaccactgatgacaattcc
atcactttaggtcctcaaggtggtctagctcggggtatgtccattagaggagaaagcatg
ttaagggacttccggattgatgtgaatgataaatctgcatcaactaacccttctgggaga
atacatggatcttcaagtggaattgtagagacaccgtctcagtcaaaatttttatctgaa
gaagatttacgggagaagtccgtatctgccataagggagttctatagtgccaaagatgag
gaggaggtagctttatgcatcaaagagctcaattcccctagtttctactcttccatgata
tcactatggatcgcagactcctttgaaaggaaagaaacagaacgagatctcttggccaag
cttctcatcagcctttgcaaacatcaaaatagcttgttcagccattttcagctcatccag
gggttcgaatatgttctttcttcacttgaggatgccgttaatgatgctcccaaggctcca
gaattccttggtcacatatttgccaaaattgcactagaggatgtggtttctttaagagac
ataggaaaaataatatatgaagggggagaagagccagggagtttattggaatctgggctt
gcatcagaagtcctaggttgtgttttagaattcataaaaatggcgaagggggattcgatg
ttgagggagatatgtttaaattctaatcttaagctggaggatttcataccgaggcatccc
accaaaaataacaagcttgctgcatttctttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (62)   
   KEGG ORTHOLOGY (1)   
   RefGene (58)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (2)   
   Pfam (2)   
All databases (78)   

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