KEGG   Asparagus officinalis (garden asparagus): 109840734
Entry
109840734         CDS       T05243                                 
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC109840734
  KO
K06941  23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aof03009]
    109840734
Enzymes [BR:aof01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.192  23S rRNA (adenine2503-C2)-methyltransferase
     109840734
Ribosome biogenesis [BR:aof03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    109840734
SSDB
Motif
Pfam: Radical_SAM Fer4_12 RlmN_N
Other DBs
NCBI-GeneID: 109840734
NCBI-ProteinID: XP_020265068
Position
5:20086668..20105431
AA seq 420 aa
MALIRIHSSLATLSSHFHYPHHRLFLSHRSCLRSSPAVSPRQLLSIVSSGSQSGIEASSK
VMLKDMDFPELEKWVQSHGFRPGQAMMLWKCLYGNNVWAHSHDELEGLNKDFKKMLSENA
SFKALSVKDIFTASDGTRKILFNLDDGMVIETIVIPCSTGRTTVCVSSQVGCAMNCQFCY
TGRMGLRKHLRTSEIVEQAVFARRLFSSEFGSITNVVFMGMGEPLHNIENVLKASAIMVD
DQGLHFSPRKVTVSTSGLVPQIKHFLSKSNCALAVSLNATTDEVRNWIMPINRKYNLSLL
LGTLKEEIRSKHRYKVLFEYVMLAGVNDSIEDAKRLIELIRGIPCKINLISFNPHSGSRF
RPTTDEKMVEFRNFLASAGCVVFMRPSRGDDRMAACGQLGEPGVIQPPMLRPPPRFQMAL
NT seq 1263 nt   +upstreamnt  +downstreamnt
atggctctcatcagaatccattcctctctcgctacattatcttctcactttcactacccc
catcatcgcctgtttctctctcatcgatcctgtttgcgttcttcccccgctgtcagccct
cgccaattgctttcgatagtctccagcggttcccaatctggtattgaagcaagctcgaag
gtcatgctcaaagacatggatttccctgagctcgaaaaatgggttcagtcgcacggcttt
aggccaggacaggcaatgatgctgtggaagtgcctttatggaaacaatgtctgggcacat
tctcatgatgaattggaaggtttaaataaagatttcaaaaaaatgttaagtgaaaatgct
tctttcaaggcattgtcagtgaaagatattttcacagcatctgatggaactcgaaagatt
ttgttcaatttggatgatggcatggtgatagagacaattgtgattccttgtagtacagga
agaacaactgtgtgtgtttcaagtcaagtgggttgtgcaatgaattgtcagttctgttac
acgggcaggatgggattgaggaagcatttaagaacatctgagattgttgaacaggctgta
tttgctcggcgtttgttctctagcgaatttgggtctattacaaatgttgtatttatgggg
atgggtgagccgcttcataacatagaaaatgtcttaaaagcttctgccataatggttgat
gaccaaggtcttcattttagccctcgcaaagtgactgtttccaccagtggtcttgttcct
cagataaaacatttcctcagcaaatctaactgtgcactagcagtcagtcttaatgcgaca
accgatgaggtaagaaattggattatgcctatcaaccggaaatacaatctaagcctgctt
ctggggacattaaaggaggagatccgctccaaacatagatataaagttctatttgaatat
gttatgcttgcaggagtaaatgatagtattgaggatgcaaagagactcatagagctcatc
cgtgggatcccttgcaagattaacctgatctccttcaaccctcatagtggatctcggttc
aggcctactactgatgagaagatggttgagttccgtaattttctggcttcagccgggtgt
gtcgtcttcatgaggcctagtagaggggatgaccggatggctgcctgtggccagctgggg
gagcctggagttatccaaccaccgatgcttcgtcctccaccaaggtttcaaatggctcta
tga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (25)   

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