KEGG   Asparagus officinalis (garden asparagus): 109842304
Entry
109842304         CDS       T05243                                 
Name
(RefSeq) ubiquitin receptor RAD23b-like
  KO
K10839  UV excision repair protein RAD23
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03420  Nucleotide excision repair
aof04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    109842304
  09124 Replication and repair
   03420 Nucleotide excision repair
    109842304
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:aof03051]
    109842304
   03400 DNA repair and recombination proteins [BR:aof03400]
    109842304
Proteasome [BR:aof03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    109842304
DNA repair and recombination proteins [BR:aof03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      109842304
SSDB
Motif
Pfam: XPC-binding UBA ubiquitin Rad60-SLD CUE UBA_3 TECR_N
Other DBs
NCBI-GeneID: 109842304
NCBI-ProteinID: XP_020266789
Position
5:complement(106067112..106074015)
AA seq 353 aa
MKLTVKTLKGTHFDLQVQPSDTVMAVKRNIEAIQGRGNYPWEKQLLIHSGKVLKDETTLE
ENQVSEDGFLVVMLSKNKTSATTGASSATQSKPVATGASSATQPAGTASSVPPTPSEVPT
QTPASENVVSGSSRGTEAPVYDEPASNLVPGNNLESMVHQLMDMGGGNWDKDTVQRALRA
AYNNPERAVEYLYSGIPTLGEAAQAEGPNTTGTAAEGDTLSGLPNSAPLDMFPQGAPIVG
GGASGGSLDFLRNNEQFQTLRAMVQANPQILQPMLQELSKQNPQLLRLIQEHHAEFLQLI
NEPVEGLEGDLSDQDMLEAMGFDRGHVIEAFLACDRNEELAANYLLEHAGDED
NT seq 1062 nt   +upstreamnt  +downstreamnt
atgaagttgacagtgaagactctcaaagggacgcacttcgatctccaagttcagccgtcc
gatacagtgatggcagtgaagaggaacatcgaagcgattcagggcagaggtaattaccca
tgggagaagcagctgttgattcacagcggaaaagttctcaaggatgagacgacattggaa
gagaaccaagttagtgaagatgggtttcttgtcgtaatgctcagcaagaacaagacctca
gccacaactggagcctcatctgctactcagagcaagcctgtggccactggagcctcgtct
gcaacccagcctgcaggaactgcttcttctgtgcctcccactccaagtgaagttcccact
caaacaccggcctcagagaacgttgttagtggctctagtagaggaactgaggcccctgtt
tatgatgaacctgcatctaatttggtaccaggaaacaatctggaatcaatggttcatcag
ctgatggatatgggtggtggtaactgggacaaggatacggttcagcgagcacttcgtgct
gcttacaataatccagagcgtgctgtggaatacttatattctggaatccctacattagga
gaagctgctcaggctgaagggccaaacacaactgggacagctgctgaaggcgatactctg
tctggattgccaaattctgcacctctagatatgtttccacagggagctcccattgtgggt
ggaggtgctagtggtgggtctcttgatttccttagaaataatgaacagttccaaacattg
cgtgcaatggtccaagcaaatccacagattttacagccaatgcttcaagagcttagcaag
cagaatcctcaacttctaagattaatccaggagcatcatgcagagtttcttcagttaata
aatgaacctgttgaaggtcttgaaggcgatctgtcagatcaagatatgttggaagcaatg
ggctttgatcgtgggcatgtcatcgaggcatttttagcctgtgataggaatgaggagttg
gctgcaaattatttgttagaacatgctggtgatgaagactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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