KEGG   Asparagus officinalis (garden asparagus): 109842841
Entry
109842841         CDS       T05243                                 
Name
(RefSeq) putative rRNA methyltransferase
  KO
K14857  AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
aof  Asparagus officinalis (garden asparagus)
Brite
KEGG Orthology (KO) [BR:aof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aof03009]
    109842841
Ribosome biogenesis [BR:aof03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    109842841
SSDB
Motif
Pfam: Spb1_C DUF3381 FtsJ ANIS5_cation-bd DSPc
Other DBs
NCBI-GeneID: 109842841
NCBI-ProteinID: XP_020267335
Position
5:40927329..40938457
AA seq 805 aa
MGKAKGKQRQDKFYHLAKEQGYRSRASFKLLEIDAKYRILPSSRSILDLCAAPGGWTQVA
VRHAPVGSFVLGIDLVAVNTVIHDGSPNVGANWTRDATSQSALVVDSVRLATYFLAPKGT
FVTKVFRSQDYTAIIYCLKQLFDKVEVFKPAASRSTSAEIYAIGLRYKAPAKIDPRLLDI
KHLFQGAIEPPKVVDVLRGTKQKRNREGYEDGVTTLWKVGLVSDFIWSENPLSILGSVGQ
LSFEDPACSSIKDHELTTEEIKSLCEDLYVLDKHGFKHLLKWRMRIRKELSSTNKVTPKD
TPTKDAKGDEDENLLNEMEELTNALERKKKREKKILAKRRAKEKVRKATGMQIDATQDSY
YDRELFSLASIKGKKELQAVDSTEIDEENDFNVSDSEDEASPAEDHEESGEMDSDEEQKR
YDEHLEEMLDEAYERYISKKGGSSKQRKRVKLARTNGQDELFEEDDGEDLTPGQDLDQEE
MKEEKNPLMVPLQEEEQPTQEQIMEQWFSQDVFAEAAEDGLFQKSDSEDEKEEEEKPLPK
VAKKSKTRDSVPSKTKVSDELEDFEVVPAEPLKTNEDSSSSSSDDSDSEEEDEDTKAEIL
AYAKKMLRKKKREEILDDAYNKYMFDDEGLPTWFVEEEKKHSQPMKPITKEEINAMKAQF
REIDARPAKKVAEAKARKKRAAMKRLEKVKQKSNSISDQTDISERSKRKMIEQLYKKATP
KKPEREYVVAKKGVQVRPGKGKKLVDPRMKKDARTKGSGNKGGGKKSRVGKGKGKGKGGG
FKGKGGKVGGGGKGRKKGGKGSMHA
NT seq 2418 nt   +upstreamnt  +downstreamnt
atggggaaagcaaagggaaaacagcgccaggacaagttctaccacttagcaaaggaacaa
ggctacagatctcgtgcctccttcaagctcctcgagatcgatgccaagtaccgcatcctc
ccctcgtcccgctcgatcctcgacctctgcgccgcccccggaggctggacccaggtcgcc
gtacgccacgcccccgtcggctccttcgtactcggcatcgatctcgtggccgtcaacacg
gtgattcacgacggatcgcctaatgttggtgctaattggacgagggatgctacgagccag
tcggcgcttgtggtggattccgttaggttggctacttatttcttggcgcccaaggggact
tttgttactaaggttttcaggtcacaggactacactgctatcatctactgccttaaacag
ctttttgataaagttgaggtgtttaaaccagctgcgagtcgtagtacatctgctgaaata
tatgctattggattgagatacaaggctcctgcaaagattgacccacgccttcttgacatt
aagcacctatttcaaggggctatagagccgccaaaggtggttgatgttcttagagggaca
aagcagaagagaaatcgtgaaggatatgaggacggagtgactaccttgtggaaggtcggt
ttagtttcagattttatttggtccgagaaccctctcagtattcttggttctgttggtcaa
ttatcttttgaagatccagcttgttcatctattaaagatcatgaattaacaacagaggag
attaaatctttatgcgaggatttatatgtcctggataaacatggctttaagcatctattg
aaatggcgcatgcgaataagaaaggagctttcttcaactaataaggtcactccaaaagat
actcccactaaagatgccaagggggatgaggatgagaatctactgaatgaaatggaagaa
ttgacgaatgctctggaacgcaagaaaaagagagagaagaagattcttgcaaaacgccga
gcgaaggagaaagtgcgcaaagcaactggaatgcaaatcgatgctacccaagacagttat
tatgaccgtgaattattttctcttgcctctattaagggaaagaaagaacttcaggctgtt
gattcaacagagattgatgaagaaaatgactttaatgtcagtgacagtgaagatgaggcc
tctcctgcagaagatcatgaggaatccggtgaaatggactctgacgaagagcagaagcga
tatgatgaacaccttgaggaaatgcttgatgaagcctatgaacggtatatatctaaaaag
ggaggaagtagcaaacagcgaaaacgagtaaaacttgcccgaactaatggtcaagatgag
ttgtttgaggaagatgatggtgaagacctaacacctggtcaggatcttgaccaagaggaa
atgaaggaagaaaaaaatcctctcatggtacctttgcaagaggaagaacagccaactcag
gagcagatcatggaacagtggttcagtcaagatgtctttgccgaagcagcagaagatggt
ctattccaaaagagcgacagtgaagacgaaaaagaggaggaagaaaaaccactacccaag
gttgccaaaaagtcgaaaaccagagattcagttccttctaaaaccaaagtctctgatgag
ctagaggactttgaggttgtaccagcagagcccttaaaaacaaatgaagactcatcctct
tcatcctccgatgattcagactcagaggaagaagatgaagacacaaaggccgaaatacta
gcatatgccaagaaaatgctgagaaagaaaaagagagaggagattctcgatgacgcctac
aacaaatacatgttcgatgatgagggtttgccgacatggtttgtggaggaagagaagaag
cacagccaacctatgaagcccataaccaaggaagaaatcaatgcaatgaaggcacagttc
agagagattgacgcccgtcccgccaagaaagtagcagaggcaaaggcccgaaagaagcgg
gcagcaatgaaaaggcttgagaaggttaagcaaaagtcaaactcaatctcggaccagact
gatatatctgagaggtcgaagaggaagatgatagagcagctctacaagaaggcgacgccg
aagaagccagagagggagtacgtggttgcgaagaagggagtccaggtgaggcctgggaaa
gggaagaagttggtggatccgaggatgaagaaggatgcaaggacgaagggaagtgggaac
aagggaggtgggaagaaaagcagggttgggaaagggaaagggaaagggaagggtggtggt
tttaaggggaaagggggaaaagttggggggggaggtaaagggaggaaaaagggaggcaag
gggagtatgcacgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (42)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (56)   

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