KEGG T05243: 109846470

Asparagus officinalis (garden asparagus): 109846470

Entry

109846470         CDS       T05243

Name

(RefSeq) DNA polymerase epsilon subunit B-like isoform X1

K02325

DNA polymerase epsilon subunit 2 [EC:2.7.7.7]

Organism

aof Asparagus officinalis (garden asparagus)

Pathway

aof03030

DNA replication

aof03410

Base excision repair

aof03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:aof00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    109846470
   03410 Base excision repair
    109846470
   03420 Nucleotide excision repair
    109846470
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aof03032]
    109846470
   03400 DNA repair and recombination proteins [BR:aof03400]
    109846470
Enzymes [BR:aof01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     109846470
DNA replication proteins [BR:aof03032]
Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    109846470
DNA repair and recombination proteins [BR:aof03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      109846470

SSDB

Motif

Pfam:

DNA_pol_E_B Dpoe2NT DNA_pol_D_N

Other DBs

NCBI-GeneID:

109846470

NCBI-ProteinID:

XP_020271297

Position

6:8703537..8712976

AA seq 530 aa
MAAIGTLKKKIQRKFKIRGFTLKTEAIDEAISFLSRFPDAEDEALELLIDELDKETLKSS
ILDREAIHRVVSLLVEADEAIDPSSEGMSNRVALRVIDSFVVPRFRYDPIKRVFYEHTGN
LPIHGEAGDKASLYRDRYQLLLQRLSRDKYFSRPVFDTEMTEADSCEITPIQSLIGCTGR
RWLMGVISQLEEGHFYLEDLTAAVPIDLTNAKITSGFFVENTVIVAEGELLSNGNFRVNT
CGFPPLEDRDASISLLMGLDFFGGGILSTEETLRLSSLEKKAVNDMFVILSDVWVDNNEK
TMEKLAVVLDGYESVEVVPSLFVLMGNFCSHPCNLSFHSFSSLRMQFGKLGEMIKSHPRI
KEHSRFLFIPGPDDAGPSKALPRCALPKYLTDELQKNVPNAIFSSNPCRVKFYTQEIVFF
RQDLLYRMRRSSLIPPSTEDTSDPFEHLVATITHQSHLCPLPLTIQPIIWNYDHCLRLYP
TPHTIVLGDQSEPKDYKYTGITCFNPGSFAHDSTFAAYRPCTQEVELSAL

NT seq 1593 nt +upstreamnt +downstreamnt
atggccgcaatcggaaccctaaagaagaagatccagcggaagttcaagatccggggcttc
accctcaaaacagaagccattgacgaggccatctccttcctctctcgtttccccgacgcc
gaagatgaggccctcgagctcctcatcgacgagctcgacaaagaaaccctgaagtcgtcg
atcttggacagagaggcaattcatcgagtggttagcctgcttgttgaggcggatgaggcg
attgatccgagctcggaggggatgagcaatcgagtggcattgagagtgatcgattcgttc
gtggtgccacggtttcgatacgatccgattaagagggtgttttatgagcacacaggaaat
ttgccaatccatggggaagctggtgataaagcttccttgtatcgggataggtaccagcta
ttacttcagaggctctctcgtgataagtacttctctagaccagtttttgatacagaaatg
actgaagctgacagttgtgagattaccccaatccaatctttgattggatgtactggaagg
agatggctcatgggcgtaatatctcaactagaagaaggccacttttacctggaagatcta
acagcagccgtaccaattgacttaaccaatgcaaagatcacttctggattctttgtcgag
aacactgtcattgttgcagaaggagagcttctttcaaatggcaatttccgagtcaatact
tgcggatttccacctttggaggacagagatgcatcgatttcattactaatgggacttgat
ttctttggtggtggaatattgtcaactgaagaaactctcagactctcatcattagaaaag
aaggcagtgaatgacatgtttgtcattctttcagatgtatgggtggataataatgagaag
accatggaaaaattggctgttgtcttggatggttatgaaagtgtggaggttgttccttct
ttatttgttttaatggggaatttttgctctcatccttgcaacctttctttccactcattt
tcaagtctcaggatgcaatttggaaagctaggggaaatgatcaaatctcacccaagaatc
aaagagcacagtcgatttttgttcatcccaggtcctgatgatgcaggaccttcaaaagct
cttccaaggtgtgctttaccaaaatatctaactgacgaactccagaagaacgttccaaat
gctattttctccagcaatccttgcagagtaaagttctacacccaggaaattgtatttttc
cgtcaggatctgctctacagaatgagacgatcttctctaattcctccctcaactgaagat
acaagcgatccttttgaacatcttgtagcaaccatcactcatcagagtcatctttgcccc
ttacctctcactatacaaccaataatctggaactatgaccactgcctccgtctataccct
actccacacacgatagtgttgggagatcaaagtgaaccaaaagactataaatataccgga
ataacatgtttcaatcctggatcattcgctcatgatagcacatttgcagcatatcgccct
tgtactcaagaagtcgagctttctgccctatag

DBGET integrated database retrieval system