KEGG   Asparagus officinalis (garden asparagus): 109851296
Entry
109851296         CDS       T05243                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like
  KO
K11583  serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
aof  Asparagus officinalis (garden asparagus)
Pathway
aof03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aof00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    109851296
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:aof01009]
    109851296
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aof03019]
    109851296
   03036 Chromosome and associated proteins [BR:aof03036]
    109851296
Protein phosphatases and associated proteins [BR:aof01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     109851296
Messenger RNA biogenesis [BR:aof03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     109851296
Chromosome and associated proteins [BR:aof03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     109851296
SSDB
Motif
Pfam: EF-hand_13 EF-hand_7 EF-hand_6 EF-hand_1 EF-hand_8 EF-hand_5 DUF4187
Other DBs
NCBI-GeneID: 109851296
NCBI-ProteinID: XP_020276947
Position
1:14894029..14909009
AA seq 542 aa
MVGMDVEVARDVGSFDPDLLQLQEISSIALKDNPQIADQLYSQWLTLPETARLVKSLIED
AKSGLPLNVSGSSNGANATATNSLPSMFPAGSAPPLSPRSSSGSPRFMKRSLGAGPSHLG
SPLKIVNEPVKEVIPQFYFQNGRPPPNDLKEQCLSRIDQIFFGHMDGLQVQDFKCVTKEI
CKLPSSFSNVLFRKIDVDCTGMVTRDAFVKYWIDSNMMTRDIATQIFTILKQPDRKYLTQ
EDFKPVLRELLASHPGLEFLQSTPEFQERYAETVIYRIFYYVNRSGNGHLTLRELKRGNL
IAALQHADEEEDINRVLRYFSYEHFYVIYCKFWELDTDHDFLINKENLIRYGNHALTYRI
VDRIFSQVPRKFTSKVEGKMGYEDFVYFMLAEEDKSSEPSLEYWFKCIDLDGNGILTPNE
MQFFYEEQLHRMECMAQEPVLFEDILCQMVDMIGPENESYFTLRDLKGCKLSGNVFNILF
NLNKFMAFETRDPFLIRQEREEPTLTDWDRFAHREYLRLSMEEDDASNGSGDVWDESLEA
PF
NT seq 1629 nt   +upstreamnt  +downstreamnt
atggtgggaatggacgtcgaagtagctagagacgtcggttcatttgatccggacctgtta
cagctacaagagatctcttccattgcgttgaaggataaccctcagattgctgatcagctc
tattctcagtggcttacacttcctgaaactgctagattggtaaaatctttgattgaagat
gcaaagtcaggactgcctttaaatgtttctgggagttccaatggtgcaaatgctactgca
accaattcgttgccctccatgttccctgcaggcagtgcacctccactttcaccaagaagc
agttctggatctccacgctttatgaaacgtagtttaggtgctggcccttcacatctagga
tctcctctgaaaatcgttaatgagcctgtaaaagaagttatacctcagttctacttccaa
aatgggcgcccaccgccaaatgatctgaaagagcagtgcttatcccgtattgatcagatt
ttctttggccatatggatggacttcaagtccaagactttaagtgtgtcacaaaggaaatc
tgcaagctaccatcatccttttccaatgtccttttcagaaagattgatgttgattgcaca
ggaatggtaacaagggatgccttcgttaagtattggattgatagcaacatgatgacgagg
gatatagctacacaaatattcacaattttgaaacaaccagataggaagtacctcactcag
gaggacttcaaacctgttctgcgagaacttttggcaagccatccagggttggagttcttg
caaagcactcctgagtttcaggaaagatatgcggaaactgtcatatatagaatattttac
tatgtgaatagatctggaaatggccacctcaccctcagggagcttaaaagaggaaattta
attgctgcattgcagcatgctgatgaggaagaggatattaacagagttttaaggtatttc
tcttatgagcatttctatgtgatatactgcaaattttgggagctggacacagatcatgac
ttcttgatcaataaggagaaccttatcagatatggaaaccatgcacttacttacagaata
gttgatagaattttctcgcaggttccaagaaaatttaccagcaaggtcgaaggaaagatg
ggatatgaagattttgtttatttcatgctggcagaggaggataaatcatctgagcccagc
cttgagtactggttcaaatgtattgatttggatggaaatggaatcctcacacccaatgaa
atgcaattcttttacgaggaacaattgcatcgtatggaatgcatggctcaggaacctgta
ctatttgaagacattttgtgtcagatggttgatatgattggaccagagaatgaaagctac
tttacgctgcgcgatttgaagggctgcaaactctcagggaatgtttttaatattcttttc
aatctcaacaagttcatggcatttgaaacccgtgatccgttccttattcgtcaggagcgt
gaagaaccgacattgacagattgggaccgctttgcccacagggaatatttaaggctgtcc
atggaagaagacgatgcctctaatggaagtggggatgtttgggatgaatcccttgaggct
cccttttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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