KEGG   Amycolatopsis keratiniphila: AORI_7323
Entry
AORI_7323         CDS       T02678                                 
Name
(GenBank) DNA excision repair protein ERCC-3
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
aoi  Amycolatopsis keratiniphila
Pathway
aoi03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aoi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AORI_7323
  09124 Replication and repair
   03420 Nucleotide excision repair
    AORI_7323
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aoi03021]
    AORI_7323
   03400 DNA repair and recombination proteins [BR:aoi03400]
    AORI_7323
Enzymes [BR:aoi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AORI_7323
Transcription machinery [BR:aoi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AORI_7323
DNA repair and recombination proteins [BR:aoi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AORI_7323
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom
Other DBs
NCBI-ProteinID: AGM09905
UniProt: R4T522
Position
8127162..8128808
AA seq 548 aa
MTDGPLIVQSDKTVLLEVDNSQADDARIAIAPFAELERAPEHVHTYRITPLALWNARAAG
HDAEQVVDALTTYSRFPVPQPLLIDIVDTMGRFGRLQIANHPAHGLVMSTIDRAVLEEIL
RHKKISPMLGARIDEDTVVVHPSERGRLKQALLKVGWPAEDLAGYVDGEAHPIDLAEDDW
ELRDYQRKAAEAFWAGGSGVVVLPCGAGKTLVGAAAMAHAKATTLILVTNTVAGRQWKRE
LVARTSLTEEEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYKHLDLFDSRDWGLVVYDEV
HLLPAPVFRMTADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDVPWRDIEAQGWIAP
AECTEVRVTLTDAERLAYATAEAEERYKLAATADTKTKVIKSLVDRHPGEPTLVIGAYLD
QLEMIGDELDAPVIQGATRNKEREELFDAFRRGEIRTLVVSKVANFSIDLPEASVAIQIS
GTFGSRQEEAQRLGRLLRPKGDGRQAHFYSVVSRDTVDTEYAAHRQRFLAEQGYAYRIVD
ADDLLRPM
NT seq 1647 nt   +upstreamnt  +downstreamnt
gtgaccgatggcccgctgatcgtccaatccgacaagaccgtgctcctcgaggtcgacaac
agccaggccgacgacgcgcggatcgccatcgcgccgttcgccgaactggaacgcgcgccc
gagcacgtccacacctaccggatcacgccgctcgcgttgtggaacgcccgcgcggccggc
cacgacgccgaacaggtcgtcgacgcgctgaccacgtactcgcggttccccgtgccgcag
ccgctgctcatcgacatcgtggacacgatgggccggttcgggcggttgcagatcgcgaac
cacccggcgcacggcctggtcatgtcgaccatcgaccgcgcggtgctggaggagatcctc
cgccacaagaagatcagcccgatgctgggcgcgcgtatcgacgaggacaccgtcgtcgtg
cacccgtccgaacgcggacggctcaagcaggcgctcctgaaggtcggctggcccgcggaa
gacctcgccggttacgtcgacggcgaagcacacccgatcgacctggccgaagacgactgg
gagctgcgcgactaccagcgcaaggccgccgaggcgttctgggcgggcggatccggcgtc
gtcgtgctgccgtgcggcgcgggcaagacactggtcggcgccgcggccatggcgcacgcg
aaggcgaccacgctgatcctggtgacgaacaccgtcgccggtcggcagtggaagcgggag
ctggtcgcgcggacttcgctgaccgaggaggagatcggcgaatactccggtgagaagaag
gagatccggccggtcaccatcgcgacgtatcaggtggtcacgcgcaagaccaagggcgag
tacaagcatctggacctgttcgattcgcgggactggggcctcgtggtctacgacgaggtc
cacctgctgcccgcgccggtcttccggatgaccgcggacctgcagtcgcggcggcggctc
gggctcaccgcgaccctcgtgcgcgaagacgggcgcgagggcgacgtgttctccctcatc
ggcccgaagcggtacgacgtcccctggcgtgacatcgaggcgcagggctggatcgccccg
gccgagtgcaccgaggtccgcgtgacgctgaccgacgccgagaggctcgcgtacgcgacg
gccgaggccgaggagcggtacaagctggcggcgaccgcggacaccaagaccaaggtgatc
aaatcgctggtcgaccggcatccaggcgagccgacgctggtcatcggcgcctatctcgac
cagctggagatgatcggcgacgaactcgacgcgccggtgatccagggcgcgacgcggaac
aaggaacgcgaggaactgttcgacgccttccggcgcggcgagatcaggacactggtcgtt
tcgaaggtcgcgaacttctcgatcgacctgccggaggcgtcggtcgcgatccagatctcc
gggacgttcggctcgcggcaggaggaggcgcagcggctcgggcggctgttgcggcccaag
ggcgacggacggcaggcgcatttctactcggtcgtctcgcgggacaccgtcgacacggag
tacgcggcgcaccggcaacggttcctggcggaacaggggtacgcgtaccggatcgtggac
gcggacgacctgctgcgcccgatgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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