KEGG   Amycolatopsis keratiniphila: AORI_7570
Entry
AORI_7570         CDS       T02678                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
aoi  Amycolatopsis keratiniphila
Brite
KEGG Orthology (KO) [BR:aoi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aoi03032]
    AORI_7570 (topA)
   03400 DNA repair and recombination proteins [BR:aoi03400]
    AORI_7570 (topA)
Enzymes [BR:aoi01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     AORI_7570 (topA)
DNA replication proteins [BR:aoi03032]
 Prokaryotic type
  DNA Topoisomerases
   AORI_7570 (topA)
DNA repair and recombination proteins [BR:aoi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      AORI_7570 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim Toprim_4 HC2 SBP_bac_3
Other DBs
NCBI-ProteinID: AGM10152
UniProt: R4THI1
Position
complement(8380746..8383658)
AA seq 970 aa
MSGEQDSVAGARTKKTAASDDGAGRRRLVIVESPTKARKIAPYLGGNYVVESSVGHIRDL
PRGAADVPAQYKGESWARLGVDVDNDFKALYVVTPDKKSKVTELKGLLKDVDELYLATDP
DREGEAIAWHLLETLKPKVPVRRMVFHEVTEQAIRAAADSTRELDGDLVDAQETRRILDR
LYGYEVSPVLWKKVMPKLSAGRVQSVATRIVVERERERMRFTSASYWDISATMDVGAEAS
PRNFPARMIAVDGARLATGRDFGSDGRLKASNNEIRVLAEADAVRLAEALKNRDFKVASV
EEKPYTRKPYAPFMTSTLQQEAGRKLRFTSERTMRIAQKLYENGYITYMRTDSTTLSESA
ISAARSQATQLYGKEYVSPSPRQYTRKVKNAQEAHEAIRPSGEVFRTPGQVAKDLDTDEY
RLYEMIWQRTIASQMADAKGTTMSVRIVGTATSGEECTFASSGRTITFAGFLKAYVEAVD
TESGGEADDKQSRLPQLVKDQALTATELSPDGHTTSPPARYSEPSLVSKLEELGIGRPST
YASIIKTIQDRGYVWKKGSALVPSWVAFAVIGLMERHFERLVDYDFTAGMEDELDRIAAG
DEHRTQWLSKFYFGGDMGVDGSVGRLGGLKKLVGSGVEDIDAREINSIPLFSDADGHTVV
VRVGRYGPYLEREVDGTSQRANLPEDLPPDELTKEIAEKLFATPQEGRVLGKDPVSGHEI
VAKEGRFGPYVTELLPEPEPLPEGATAAQKKAAKAKQPKPRTGSLFKSMSIETMNLEDAL
KLLSLPRVVGKDPESGDEITAQNGRYGPYLKKGTDSRSLTTEDQLFSITLEEALKIYSEP
KQRGRSATAKPPLKELGDDPVSGKPMVVKDGRFGPYVTDGEYNATLRKSDSIEELTAERA
AELLAEKRAKGPAPKRKAPARKTAASKTTATKTTAAKKTTATKTAATKTAAAKSTAAKKP
STRSTATKTK
NT seq 2913 nt   +upstreamnt  +downstreamnt
atgagcggagagcaggacagcgtggcaggagcacggacgaagaagaccgcggcgtcggac
gacggcgcgggccgtcgtcggctggtgatcgtcgagtcgccgaccaaggcccgcaagatc
gccccgtacctcggcggtaactacgtcgtggagtcctccgtcggacacatccgcgacctt
ccccgcggcgcggccgacgtgcccgcccagtacaagggcgagtcgtgggcgcggctgggt
gtcgacgtcgacaacgacttcaaggcgctctacgtcgtcacgccggacaagaagtccaag
gtcacggagctgaagggcctgctgaaggacgtcgacgagctctacctcgccacggacccc
gaccgcgagggcgaggccatcgcgtggcatctgctggagaccctcaagccgaaggtcccg
gtgcgccggatggtcttccacgaggtcaccgagcaggcgatccgcgccgcggccgacagc
acccgcgagctcgacggggacctcgtcgacgcgcaggagacccgccgcatcctggaccgg
ctctacggctacgaggtctcgcccgtgctgtggaagaaggtcatgccgaagctttcggcc
ggccgcgtgcagtcggtggcgaccaggatcgtggtcgagcgggagcgcgagcgcatgcgc
ttcacctcggcgtcgtactgggacatctccgcgacgatggacgtcggcgccgaagcgtcg
ccccgcaacttcccggccaggatgatcgccgtcgacggcgcgcgcctggccaccggccgt
gacttcggctcggacgggcggctcaaggcctcgaacaacgagatccgggtgctggccgag
gccgacgccgtccggctggccgaggcgctcaagaaccgcgacttcaaggtcgcgagcgtc
gaggagaagccgtacacgcgcaagccgtacgcgcccttcatgacctcgaccctgcagcag
gaggcgggccgcaagctgcggttcacctccgagcgcaccatgcggatcgcgcagaagctg
tacgagaacgggtacatcacttatatgcgtaccgactccacgacgctgtcggagtcggcg
atctcggcggcgcgcagccaggcgacgcagctgtacggcaaggaatacgtctcgccgtcg
ccgcgccagtacacccgcaaggttaagaacgcgcaggaagcccacgaggcgatccgtccc
tcgggtgaggtcttccgtacgccgggccaggtcgcgaaggatctggacaccgacgagtac
cgcctttacgagatgatctggcagcgcacgatcgcgtcgcagatggcggacgcgaagggc
accacgatgtcggtgcgcatcgtcggcacggccaccagtggcgaggagtgcacgttcgcc
tcgtcgggccgcacgatcaccttcgccgggttcctcaaggcgtacgtcgaggccgtcgac
accgagagcggtggcgaggcggacgacaagcagagccgtctgccgcagctggtcaaggac
caggcgctgaccgcgaccgagctgagcccggacgggcacaccacgtcgccgccggcgcgc
tactcggagccgagcctggtcagcaagctcgaggagctgggcatcggccgcccgtcgacg
tacgcgtcgatcatcaagaccatccaggaccgcggctacgtgtggaagaagggttccgcg
ctggtgccctcctgggtcgcgttcgccgtgatcggcctgatggagcggcatttcgagcgg
ctggtcgactacgacttcaccgccggcatggaggacgagctcgaccgcatcgccgccggt
gacgagcaccggacgcagtggctgtcgaagttctacttcggcggcgacatgggcgtcgac
ggttccgtcggccgtctcggcgggctgaagaagctggtcggctcgggtgtcgaggacatc
gacgcccgcgagatcaactcgatccccctgttcagcgacgccgacgggcacaccgtcgtc
gtgcgcgtcggccgctacggcccgtacctcgagcgcgaggtggacgggacgtcgcagcgg
gcgaacctgccggaggacctgccgccggacgagctgaccaaggagatcgcggagaagctc
ttcgcgacgccgcaggaaggccgcgtactcggcaaggacccggtcagcgggcacgagatc
gtggcgaaggaaggccgcttcggcccgtacgtcaccgagctcctgcccgagccggagccg
ctgcccgaaggcgcgaccgccgcgcagaagaaggccgcgaaggcgaagcagccgaagccg
cggacgggctcgctgttcaagtcgatgtcgatcgagacgatgaacctcgaagacgcgctg
aagctgctttcgctgccgcgcgtggtcggcaaggacccggaatccggcgacgagatcacc
gcgcagaacgggcgctacgggccgtacctgaagaagggcacggactcgcgttcgctcacc
accgaggaccagctgttctcgatcacgctcgaagaggcgctgaagatctactcggagccg
aagcagcgtggccggtccgcgaccgcgaagccgccgctcaaggagctcggcgacgacccg
gtgtccggtaagccgatggtggtcaaggacggccggttcggcccgtacgtgaccgatggc
gagtacaacgcgacgctgcggaagtcggacagcatcgaggagctgacggccgagcgcgcc
gccgaactgctggcggagaagcgcgcgaagggcccggcgcccaagcgcaaggctccggcg
cggaagacggcggcgtcgaagacgacggccaccaagacgaccgcggccaagaagaccacc
gcgaccaagaccgctgcgaccaaaaccgcggcagcgaagtcgacagcggcgaagaagcct
tcgacgcgctcgacggccacgaagacgaagtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system