KEGG   Bradyrhizobium oligotrophicum: S58_52970
Entry
S58_52970         CDS       T02484                                 
Name
(GenBank) lipoamide dehydrogenase, E3 component is part of three enzyme complexes
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
aol  Bradyrhizobium oligotrophicum
Pathway
aol00010  Glycolysis / Gluconeogenesis
aol00020  Citrate cycle (TCA cycle)
aol00260  Glycine, serine and threonine metabolism
aol00280  Valine, leucine and isoleucine degradation
aol00310  Lysine degradation
aol00380  Tryptophan metabolism
aol00620  Pyruvate metabolism
aol00630  Glyoxylate and dicarboxylate metabolism
aol00640  Propanoate metabolism
aol00785  Lipoic acid metabolism
aol01100  Metabolic pathways
aol01110  Biosynthesis of secondary metabolites
aol01120  Microbial metabolism in diverse environments
aol01200  Carbon metabolism
aol01210  2-Oxocarboxylic acid metabolism
aol01240  Biosynthesis of cofactors
Module
aol_M00009  Citrate cycle (TCA cycle, Krebs cycle)
aol_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
aol_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
aol_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:aol00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    S58_52970
   00020 Citrate cycle (TCA cycle)
    S58_52970
   00620 Pyruvate metabolism
    S58_52970
   00630 Glyoxylate and dicarboxylate metabolism
    S58_52970
   00640 Propanoate metabolism
    S58_52970
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    S58_52970
   00280 Valine, leucine and isoleucine degradation
    S58_52970
   00310 Lysine degradation
    S58_52970
   00380 Tryptophan metabolism
    S58_52970
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    S58_52970
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aol04147]
    S58_52970
Enzymes [BR:aol01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     S58_52970
Exosome [BR:aol04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   S58_52970
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Pyr_redox_3 NAD_binding_8 AlaDh_PNT_C Thi4 FAD_binding_2 FAD_binding_3 Biotin_lipoyl_2 GCV_H HI0933_like 3HCDH_N
Other DBs
NCBI-ProteinID: BAM91276
UniProt: M4ZCR3
Position
complement(6002524..6004269)
AA seq 581 aa
MAQLIDVKVPDIGDFKDVAVIEVLVKPGETVAVDTSLIIVESDKASMEIPSSHAGTVKEL
WIKTGDKVSEGSVVLSLETAGVTASATPAPAVAPSAVAAAPAPIASSYSGKADIDCEMLV
LGAGPGGYSAAFRAADLGMKTVLIERYGTLGGVCLNVGCIPSKALLHTAAVIDEVKHLPD
HGISFGAPQIDLDKLRAFKDGVIKKLTGGLAGMAKARKVEVVTGVGSFVDPHHLEVATAS
GKTTIRFAKAIIAAGSQAVKLPFLPDDPRIVDSTGALELKSIPKRMLVIGGGIIGLEMAT
VYSTLGTRIDVVEMLDGLMQGADRDLVKVWEKINAHRFDKVMLKTRTVGAKATDAGIEVS
FDGEQAPSGPQLYDLVLVAVGRSPNGKAISADKAGVVVTDRGFINVDKQMRTNVAHIFAI
GDVVGQPMLAHKAVHEGHVAAEAAHGEKSYFDARQIPSVAYTDPEVAWAGKTEEQCKAEG
IKFGKAVFPWAASGRAIANGRDEGFTKLLFDATTHRIIGGGIVGTHVGDLISEICLAIEM
GCEPADIGKTIHPHPTLGESIGMAAEVFEGHCTDLPPQKRK
NT seq 1746 nt   +upstreamnt  +downstreamnt
atggctcagctgatcgacgtgaaggtgccggatatcggtgacttcaaggacgtggccgtg
atcgaggtactggtgaagccgggcgagacggtggccgtcgataccagcctcatcattgtc
gagtccgacaaggcctcgatggaaatcccatcgtcgcacgccggcacggtcaaggagctc
tggatcaagactggcgacaaggtcagcgaaggttcggtcgtcctcagtttggagacggca
ggtgtgaccgccagcgcaacaccggccccggccgttgcgccgtccgccgtagcagccgcg
cccgcgccgatcgcctcgtcctactccggcaaggccgacatcgactgcgagatgctggtg
ctcggcgccggaccgggtgggtattccgcggcattccgcgccgccgatctcggcatgaag
acggtgctgatcgagcgctacggcacgctcggcggcgtctgcctcaatgtcggctgcatc
ccgagcaaggcgctgctgcataccgccgccgtcatcgatgaagtgaagcatcttcccgat
cacggcatctcgtttggcgcgccgcagattgatctcgacaagctgcgtgcgttcaaggac
ggcgtgatcaagaagctgaccggcggcctcgccggcatggccaaggcgcgcaaggtcgag
gtggtgaccggcgtcggcagcttcgtcgatccccatcatctcgaggtcgcgaccgcgagc
ggcaagacgacgatccgcttcgccaaggcgatcattgccgccggcagccaggcggtgaag
ctgccgttcctgccagacgacccgcgcatcgtcgattccaccggcgcgctggagctgaag
tcgatcccgaagcggatgctggtgatcggcggcggcatcatcgggctggaaatggcgacg
gtctattcgacgctcggcacgcgcatcgacgtcgtcgagatgctcgacggcctgatgcag
ggggccgatcgcgatctcgtcaaggtctgggagaagatcaacgcccaccgcttcgacaag
gtgatgctgaagaccaggaccgtcggcgccaaggccaccgacgccggcatcgaggtgagc
ttcgacggcgaacaggcgccatcagggccgcagctctacgatctcgtactcgtggccgtc
ggccgcagcccgaacggcaaggcgatatcagccgacaaggccggcgtcgttgtcaccgac
cgtggcttcatcaatgtcgacaagcagatgcgcaccaatgtcgcgcacatcttcgcgatc
ggtgacgtcgtcggacagccgatgctggcgcacaaggccgtgcatgaaggccatgtcgcg
gccgaagccgcgcatggcgaaaaatcctacttcgacgcgcggcagatcccatcggtggcc
tacaccgatcccgaggtggcctgggccggcaagaccgaggagcagtgcaaggccgaaggc
atcaagttcggcaaggcggtcttcccctgggcggcgtcgggccgcgccatcgccaatggc
cgcgacgagggtttcacgaagctgctgttcgacgcgaccacccaccgtatcatcggcggc
ggcatcgtcggcacccatgtcggagatctcatcagcgagatctgcctggccatcgagatg
ggttgcgagccggccgatatcggcaagaccatccatccgcatccgacgctcggcgaatcc
atcggcatggctgccgaggtgttcgaagggcattgcaccgatctgccgccgcagaaacga
aaatag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (23)   
   KEGG PATHWAY (16)   
   KEGG MODULE (7)   
Chemical substance (27)   
   KEGG COMPOUND (27)   
Chemical reaction (11)   
   KEGG ENZYME (1)   
   KEGG REACTION (10)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (16)   
   Pfam (16)   
All databases (85)   

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