KEGG   Aspergillus oryzae: AO090012000584
Entry
AO090012000584    CDS       T01018                                 
Name
(RefSeq) unnamed protein product; RNA helicase nonsense mRNA reducing factor (pNORF1)
  KO
K14326  regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3]
Organism
aor  Aspergillus oryzae
Pathway
aor03013  Nucleocytoplasmic transport
aor03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aor00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    AO090012000584
   03015 mRNA surveillance pathway
    AO090012000584
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aor03019]
    AO090012000584
Enzymes [BR:aor01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     AO090012000584
    5.6.2.5  RNA 5'-3' helicase
     AO090012000584
Messenger RNA biogenesis [BR:aor03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     AO090012000584
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     AO090012000584
SSDB
Motif
Pfam: UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD UvrD-helicase Helicase_RecD PIF1 SLFN-g3_helicase nSTAND3 AAA_22 AAA_16 ATPase AAA_10 Ribosomal_S27e
Other DBs
NCBI-GeneID: 5988051
NCBI-ProteinID: XP_001727577
UniProt: Q2UCH7
Position
4:1482546..1485827
AA seq 1072 aa
MAALGDDSRELDDITGGLRPRRHDDDDDGSDNGDDDLESTTSAPAAENAENQRHTEEEKE
LPPHACAYCGIHNPSSVVKCLSCSKWFCSARGNTSSSHIVNHLVRARHKEVQLHPASSLG
DTILECYNCGTKNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSRWQPLIEDRS
FLPWLVAAPSDQEQLRARHLSPQLIAKLEEMWKENSQATFSDLEKATAVDDEPAPVLLRY
DDAFQYQNIFGPLVKIEADYDRKLKESQSQDGLIVRWDLGLNNKHLASFILPKLELGDVK
LAVGDEMRLKYTGELRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECTHNFTAD
YVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSVPGLPELN
GSQINAVKSVLQRPLSLIQGPPGTGKTVTSATIIYHLAKLNGGQVLVCAPSNVAVDQLCE
RIHRTGLKTVRVTAKSREDVESPVGFLSLHEQVRLNDSNIELLKLNQLKAELGELSSQDE
KRLKQLTRSAEREILNNADVICCTCVGAGDPRLAKLKFRTVLIDESTQSAEPECMIPLVL
GCKQVVLVGDHQQLGPVIMNKKAAKAGLNQSLFERLVILGCSPIRLNVQYRMHPCLSEFP
SNMFYEGSLQNGISSIERLRRDVDFPWPISDNPMMFWSNLGNEEISASGTSYLNRTEATN
VEKIVTRFFKAGVQPGDIGIITPYEGQRSYIVSSMQATGTFKKEHYKEIEVASVDAFQGR
EKDFIILSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLAILGNPKVLSKHPLWNCLLQHF
KERHCLVEGPLSNLQESLIQFSRPKQAYRGPQRFQMAYNHASSVTSGMMNGKNGHRNDFH
DTGSVVGYIPDDVSSVHSSALGGVGIPSGYPPMFQNFADSWPALPGNRRANGNRGKGAPS
IAGESIAATESDVTASIIDGKSVDQGGVSLAGLSIHDMSKQPSLSQSDRLKRYVESGGRE
PYKPGVADNNSIFGGSSASIRVTRGVPGHIIDDDDTRSVSTAFASQVGGNYD
NT seq 3219 nt   +upstreamnt  +downstreamnt
atggcggctctaggcgatgattcaagggaattggatgacataactggtggtctccgcccg
cggaggcatgacgatgatgatgacggctcggataatggggatgacgacctagaaagtaca
actagtgctccggctgctgagaatgcagaaaatcaaagacacacggaggaggaaaaggag
cttccgccacatgcatgcgcatattgcggcattcataatccgagcagtgttgtgaaatgt
ctctcatgcagcaaatggttttgcagtgctcgtggaaatacgtcgtcctctcacattgtc
aaccacctcgttcgagcacgacacaaggaagtgcaattacaccctgcctcgtctctcgga
gatacaattctggagtgctataattgcggaactaagaatgtctttcttcttgggttcatt
ccagcgaagtccgatacggtcgtcgtattactatgccgccaaccttgtgccgccatgcca
tcgtccaaggacatgaactgggatacttcccgctggcagccactcatagaagatcgttca
tttctgccatggctagtagctgcgccgtctgaccaagagcaactgcgagctcgccacctc
agccctcagcttattgcgaaattggaggaaatgtggaaagaaaactcccaagccacgttt
tcagatctcgagaaggccaccgctgtagatgacgaacctgctcccgttcttttacgttat
gatgatgctttccagtatcaaaacatctttggaccactcgtcaagattgaagcggattac
gatcgaaaattgaaggagtcgcagtcgcaggatgggttgattgtgcgttgggaccttggt
cttaacaacaaacatctggctagcttcattctcccaaagcttgagcttggagacgtcaaa
ttggctgtgggagacgaaatgcgactgaaatacactggtgaactgcggcccaagtgggaa
ggggttggatacgtcatcaagatcccgaacaaccagtctgacgaggttactattgagttg
cgagcaaagggagatcataagtcggtgcctacagaatgtacacacaatttcactgccgac
tatgtatggaagtccacctcctttgatcgtatgcaactcgccatgaagacattcgcagtt
gatgagatgagcgtttccggctacattttccatcggcttctgggtcacgaggtcgccgct
gcaccaatgaagacacaaatgcctaagaagttcagtgtccctggacttccagaactaaat
ggtagccagattaatgcagtcaagagtgtgctacagaggcctctgagtctcattcaggga
cctcccggaaccggaaagactgtcacctccgctaccatcatttatcatcttgccaaactt
aatggaggtcaggtcctagtctgcgctccttccaacgtcgctgttgatcaactctgcgag
cgtatccacagaacaggtttgaagacagtgcgtgtaaccgccaaatctcgcgaagatgtg
gaatctcccgttggcttcttgtccctgcatgagcaagttcgcctgaatgacagcaatatt
gaactcctgaagcttaaccagcttaaggcggaactcggggagttgtcaagtcaagacgaa
aagcgactgaaacagctcacgcgttcagcggagcgcgagattctgaacaacgctgacgtt
atctgctgcacttgcgtcggtgccggtgaccctcgtctcgcgaaactcaagttccgcact
gtattaattgacgaatctactcaatcagccgaaccggagtgtatgattccgttggttcta
ggatgcaagcaggttgttctcgttggtgatcatcagcaacttggacccgtcattatgaac
aagaaagcagccaaagcaggcctcaatcagtcgctttttgagcgacttgttatattgggt
tgctctcctatccgcttgaacgtgcagtatcgtatgcatccctgtctttcagaattccca
tcgaacatgttctacgagggctctctgcagaacggtatctcttctattgagcgtcttcgt
cgtgatgttgacttcccctggcccatcagcgataatcctatgatgttctggtcgaacctt
ggcaatgaggagatctccgcctctggaacttcttatctcaatcgtaccgaagccacaaat
gtggagaaaattgtgacccgtttcttcaaggctggtgtacagcctggagacattggtatc
attaccccttatgaaggccagcgtagctacattgttagctccatgcaggcaaccggtacc
tttaagaaggagcactacaaggaaatcgaagttgcctccgttgatgctttccagggacga
gagaaggacttcatcatcctctcttgtgtgcgttccaacgaccaccaaggcatcggtttc
ttgagcgatccgcgtcgtctcaatgttgcgcttacacgagcaaagtatggtctagcgatc
cttggtaatccgaaggtgctatctaagcatcccttgtggaactgcctgttgcagcacttc
aaagaacggcattgtctggtcgaggggcctctgtctaatcttcaggaatccctgatccag
tttagccggcctaaacaggcatatagagggccccagcgattccagatggcgtataaccac
gcctctagtgtgaccagtggaatgatgaatggaaaaaatgggcaccgcaacgacttccac
gacaccggatccgtggtaggctatattcctgatgatgtctcctctgtccattcttctgct
cttggcggtgtcggtattccttcaggatatcctcctatgttccagaacttcgcagactct
tggcctgccctcccaggaaaccgtcgggccaatggtaacagaggaaagggggcgcctagc
attgctggcgaatccattgcagcgacagaatctgacgttactgcaagcatcattgatggc
aagagtgttgatcagggcggcgtgagtctcgctggacttagtatccacgatatgagcaaa
cagcccagtctcagtcagtccgaccggctgaaacgctatgtcgaatccggtggtcgcgag
ccttacaagcctggtgttgctgataataacagcatctttggtggaagctctgccagcatt
cgtgtgactcgtggtgtaccaggccacatcattgatgacgacgacacacgcagcgtttct
actgcgtttgcgagccaggtagggggaaactacgattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (18)   
   Pfam (18)   
All databases (33)   

Download RDF
DBGET integrated database retrieval system