KEGG   Isoalcanivorax pacificus: S7S_12355
Entry
S7S_12355         CDS       T03580                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
apac  Isoalcanivorax pacificus
Brite
KEGG Orthology (KO) [BR:apac00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:apac03009]
    S7S_12355
Enzymes [BR:apac01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     S7S_12355
Ribosome biogenesis [BR:apac03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    S7S_12355
SSDB
Motif
Pfam: tRNA_U5-meth_tr Methyltransf_31 Methyltransf_25 Cons_hypoth95 RrnaAD TRAM MTS Met_10 Methyltr_RsmB-F PCMT Methyltransf_11 Methyltransf_15 Methyltrans_SAM Methyltransf_23 Methyltransf_12 Ubie_methyltran TPMT CMAS UPF0020 Methyltransf_4 PrmA FtsJ Methyltransf_32 zf-C3HC4_3
Other DBs
NCBI-ProteinID: AJD48883
UniProt: A0A0B4XR21
Position
complement(2810004..2811338)
AA seq 444 aa
MGRRRRHKPLPKGEFAADIARLSHDGRGIARIEGKTTFIDNALPGERVQFRYTGLHGKFD
EGLAVSIQQAAPERAEPPCQHAMLCGGCSLQHMSSEAQIQMKQAVLAEQLDHFGGLVPDQ
WLPPLTGPVTGYRGKARLGARYVDPRNTALVGFREKRNKFLADIERCEVLVPEIGHSLMA
LRELVGGLDGRYRLPQIEVAAGDDVIALVFRHMDPLTPADQAAIVTFCQQRGWHCYLQPG
NESTVHRVWPTDGEERLYYQLPVDNVSLAFHPTDFTQVNAVINRKMVPLALDLLDISPDH
RVLDLFCGLGNFTLPLARRARQVVGVELSEAMVQRGYENARRNGMENLAFYAWDLSQDVA
GQAWAAERFDRILIDPPRAGALEMVRLMPQFGAGKLVYVSCNPATLARDAGELRRLGYRL
RAAGVMDMFPHTTHVESIALFERT
NT seq 1335 nt   +upstreamnt  +downstreamnt
atgggacgcagaagacgacacaagccgctgccgaaaggcgagttcgcggcggacattgca
cgcctgagccacgatggccggggcatcgcccgtatcgagggcaagaccacttttatcgac
aatgcgctgcccggcgagcgcgtgcagttccgctacaccggcctgcacggcaagtttgac
gaagggctggcggtgagcatccagcaggccgccccggagcgcgccgagccaccctgccag
cacgccatgctgtgcggcggctgcagcctgcagcatatgagctccgaggcgcagatacag
atgaagcaggcggtgctggccgagcagctggatcacttcggtggcctggtgccggaccag
tggctgccgccgctgaccgggccggtgacgggctaccggggcaaggcgcgcctgggcgcg
cgctatgtcgacccgcgcaataccgccctggtcgggttccgggaaaaacgcaataaattc
ctggcggacattgagcgctgcgaagtgctggtgccggaaatcggccattcgctgatggcg
ttgcgggaactggtcggcgggctggatggccgttatcgcctgccgcagatcgaggtggcg
gccggcgatgacgtgatcgcgctggtgttccgtcatatggacccgctgacaccggccgac
caggccgccatcgtgacgttctgccagcagcgtggctggcactgctacctgcagccgggc
aacgagagcacagtacaccgggtgtggcccaccgacggtgaggaacgcctgtactaccaa
ttgccagtggataacgtctcgctggcctttcaccctacggacttcacccaggtgaatgcg
gtgatcaaccgcaagatggtgccgctggcactggatttgctggatatctccccggaccac
cgggtgctggacctgttttgtggcctgggcaattttaccttgccactggcgcgccgggcg
cggcaggtggtgggcgtggagctcagcgaggcgatggtgcagcgcggttacgagaatgca
cgccgtaacggtatggaaaacctggctttttacgcctgggacctgagccaggacgtggcc
ggtcaggcctgggctgcagagcggttcgaccgcatcctgatcgacccgccgcgcgccggg
gcccttgaaatggtgcgcctgatgccccaattcggggccggtaaactggtgtatgtgtcc
tgcaacccggccaccctggcgcgggatgccggcgagctcaggcgcctgggctaccggctg
cgggcggctggcgtgatggacatgttcccgcacactacgcatgtggaatcgatagccctg
tttgaacgcacctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (24)   
   Pfam (24)   
All databases (33)   

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