KEGG   Isoalcanivorax pacificus: S7S_14410
Entry
S7S_14410         CDS       T03580                                 
Name
(GenBank) hypothetical protein
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
apac  Isoalcanivorax pacificus
Pathway
apac03420  Nucleotide excision repair
apac03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:apac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    S7S_14410
   03430 Mismatch repair
    S7S_14410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apac03400]
    S7S_14410
Enzymes [BR:apac01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     S7S_14410
DNA repair and recombination proteins [BR:apac03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     S7S_14410
   MMR (mismatch excision repair)
    Other MMR factors
     S7S_14410
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 AAA_11
Other DBs
NCBI-ProteinID: AJD49294
UniProt: A0A0B4XM03
Position
3248254..3249993
AA seq 579 aa
MPDPQSPAEVASQRALDAMFRSLDAGEHFRLEAGAGAGKTYSLIKALHYLIERHKSTFPR
KNKQIACITFTNVARDEIAARTDRSPMVYCDTNHAFCWSLISGFQKQLRGLVEAMPAWQE
RIAEAGGGLGNRVIEYNFGHRSIREDRVSLHHDDVLPLTVSLMEHAKFRHIVTDRFPIIL
VDEYQDTDKDWVEAIQRLFLGNPPSPLFGFFGDHWQKIYGNGCGRLEHPQVKEIGKEANF
RSVKAIVDCLNRMRPELQQFVEDPDAIGQVSVFHTNAWTGGRQTGAHWGGDLPSEVGHDT
LEGVKASLTQEGWDFSPESTKVLMLTHRLLASEQGYASLPSVFRYNDSFAKKEHPYIAFF
VDQLEPACDAFSANRFGAMFDALGGNTPLLRSQADKAAWHDAMSQLLAIRENGTVGEVID
HLLNRRKPRLPEAIEKRERELREFDRASGEEMPAALAEIEKLRAVRYAEIKTLRSYLDGH
SPFETKHGVKGAEFENVLVVIGRGWNQYNFGEMLELAGSAAIPPGKQAAFERNRNLFYVA
CSRPKRRLALLFTQQLSPDAIATLERWFLPESIRAVAFS
NT seq 1740 nt   +upstreamnt  +downstreamnt
atgcctgatccgcagtcaccggccgaggttgccagccagcgcgctcttgatgccatgttt
cgcagcctggatgccggagagcacttccggctagaagctggagcaggcgctgggaagacc
tactccctcatcaaagcgctccactatttgatcgagcgccacaaaagcacatttccaagg
aaaaacaagcagattgcgtgcattacatttaccaatgtggcccgcgatgaaattgccgcc
cgtactgacagaagcccaatggtgtactgcgacaccaatcatgccttctgttggtcattg
atcagtggcttccagaaacaactccgtggtttggttgaggcgatgccggcatggcaagag
agaattgcggaagctggaggcggcctgggtaaccgtgtaatcgagtacaactttgggcac
cgctccattcgtgaagatcgcgtgtctctccatcacgatgatgtgttgcccctcactgtt
tcattgatggagcatgccaaatttaggcatatagtgacagatcggtttccaatcattctt
gtggatgaatatcaagataccgataaggattgggtcgaggcgattcagcggctgtttttg
gggaatccgccttcacccctattcggcttcttcggcgaccattggcagaagatatatggc
aatggatgcggaagacttgagcatccgcaagtcaaagagattggcaaggaagccaacttc
cgatcagtcaaagccattgttgactgcctcaaccggatgcgcccggagctacaacaattt
gtcgaagaccctgacgctattggacaggtcagcgtatttcatacaaatgcctggactgga
ggacgacaaaccggtgcccattggggaggagatttaccttcggaagtcggccacgacaca
cttgagggagtgaaggcctcgttgacacaagagggatgggatttttccccggaaagtaca
aaggtactcatgctgacgcataggcttcttgccagtgagcagggctatgccagcttgcca
tcagtctttcgttacaacgattcctttgccaagaaggaacatccgtatattgccttcttc
gtagaccagttggagcctgcgtgcgatgccttctccgcgaataggttcggcgccatgttc
gatgcgctgggcggtaacacgccgctattgcggagtcaggccgataaggcagcctggcac
gatgcgatgagccagctactggcgattcgcgaaaatggcacggtcggagaagtcatcgac
cacctgctcaaccggcggaagccaagactcccggaagccatcgagaagcgtgagcgggaa
ctacgcgagttcgatcgagcaagcggcgaagagatgccggccgcactggcggagatagag
aagctacgcgcggtcagatacgcagaaatcaaaacgctacggagctatctggatggtcac
tctccctttgaaaccaaacacggagtaaagggcgcggagttcgagaatgttcttgttgtc
atcggtcgcgggtggaaccagtacaactttggagagatgctcgaactggcaggaagcgca
gccatcccacccgggaagcaggcggccttcgagcgaaatcgaaacttgttctatgttgcc
tgctcaagaccgaaacgccgccttgccctgctgttcacacagcagctttcgccagatgcc
atcgcaacacttgaaaggtggttcttgccagagagcatccgtgctgtcgctttttcgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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