KEGG   Malaciobacter pacificus: APAC_1373
Entry
APAC_1373         CDS       T06712                                 
Symbol
hup
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
apai  Malaciobacter pacificus
Brite
KEGG Orthology (KO) [BR:apai00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apai03032]
    APAC_1373 (hup)
   03036 Chromosome and associated proteins [BR:apai03036]
    APAC_1373 (hup)
   03400 DNA repair and recombination proteins [BR:apai03400]
    APAC_1373 (hup)
DNA replication proteins [BR:apai03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    APAC_1373 (hup)
Chromosome and associated proteins [BR:apai03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    APAC_1373 (hup)
DNA repair and recombination proteins [BR:apai03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      APAC_1373 (hup)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267 HU-CCDC81_euk_2 HU-CCDC81_bac_2 HU-CCDC81_euk_1 Transposase_21
Other DBs
NCBI-ProteinID: QEP34486
UniProt: A0A5C2HBA6
Position
complement(1378673..1378948)
AA seq 91 aa
MNKAEFIDAVAAKAGLSKKDAKGAVDAVLDTITETLVKKESVSFIGFGTFTTADRAARTA
KVPGTDKTVEVPATTVAKFKVGKALKEAVAK
NT seq 276 nt   +upstreamnt  +downstreamnt
atgaacaaagcggaatttattgatgcagtagcagctaaagctggtttatctaaaaaagat
gcaaaaggtgcagttgacgctgtattagatacaattactgagactttagtaaaaaaagaa
tctgtaagttttatcggatttggtacatttactactgctgatagagctgcaagaactgct
aaagttccaggaacagacaaaactgttgaagtacctgctactactgttgcaaaattcaaa
gttggtaaagctttaaaagaagctgtagctaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (15)   

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