KEGG   Aeribacillus pallidus: AP3564_17220
Entry
AP3564_17220      CDS       T04993                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
apak  Aeribacillus pallidus
Brite
KEGG Orthology (KO) [BR:apak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apak03032]
    AP3564_17220
   03036 Chromosome and associated proteins [BR:apak03036]
    AP3564_17220
   03400 DNA repair and recombination proteins [BR:apak03400]
    AP3564_17220
DNA replication proteins [BR:apak03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    AP3564_17220
Chromosome and associated proteins [BR:apak03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    AP3564_17220
DNA repair and recombination proteins [BR:apak03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      AP3564_17220
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 DUF2267 Ribosomal_L12 HU-DNA_bdg Rpf1_C HU-CCDC81_euk_1 VWA_3
Other DBs
NCBI-ProteinID: ASS91749
UniProt: A0A161ZS84
Position
complement(3569458..3569736)
AA seq 92 aa
MNKTELINAVAEASELSKKDATKAVDAVFDTILESLKKGDKVQLIGFGNFEVRERSARKG
RNPQTGEEIEIPASKVPAFKPGKALKDAVAGK
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattaatcaacgctgtagcagaagctagcgaattatccaaaaaggat
gcaacgaaagctgtagatgctgttttcgatacaattttagaatctttgaaaaaaggtgac
aaagttcaactcatcggttttggaaactttgaagtgcgtgagcgttcagcgcgcaaaggt
cgcaatcctcaaactggtgaagaaattgaaattccggcaagcaaagtgcctgcgtttaaa
ccaggcaaagctcttaaagatgcagttgctggcaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (32)   

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