KEGG   Alteracholeplasma palmae: BN85400070
Entry
BN85400070        CDS       T03096                                 
Symbol
gyrA
Name
(GenBank) DNA gyrase alpha subunit
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
apal  Alteracholeplasma palmae
Brite
KEGG Orthology (KO) [BR:apal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apal03032]
    BN85400070 (gyrA)
   03400 DNA repair and recombination proteins [BR:apal03400]
    BN85400070 (gyrA)
Enzymes [BR:apal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     BN85400070 (gyrA)
DNA replication proteins [BR:apal03032]
 Prokaryotic type
  DNA Topoisomerases
   BN85400070 (gyrA)
DNA repair and recombination proteins [BR:apal03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      BN85400070 (gyrA)
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C
Other DBs
NCBI-ProteinID: CCV63584
UniProt: U4KJI7
Position
6867..9488
AA seq 873 aa
MSEEIKDDFETSKTTEGHIKEVNISSEMRKSFLSYAMSVIVSRALPDIRDGLKPVQRRIL
YGMNELGVYSNSSYKKSARIVGDVMGKYHPHGDSSIYEAMVRMSQDFSYRYPLVDGHGNF
GSIDGDGAAAMRYTEARMSKIAMEMLRDIDKNTIDFIDNYDASEKEPAVLPARYPNLLVN
GSTGIAVGMATNIPPHDLGEVVDGLLAYIDNKDITVDELMEYIKGPDFPTGGQILGLSGL
RAAYRTGNGIIAIRAKAEIQTHKNKNSIVVTEIPYQVNKTKLIERIAELAKDKIIEGITD
LRDESNRKGMRIVIELRRDVNPHVMLNNLYKYTQLQVSFGMNMIALVKGEPKTVTLKDML
EGYFEFQMEVIQRRTQYELEKAEARIHIINALVKALNDVDRAVELIKTSKDGEEAKQRLI
ETYDFDDIQAKAILDMRLQRLTSLEILKIKDEAEELRIKIEGYNEIIASHERKEAIIKEE
ITEIRNKYDDGRKSEINLYEDLDIDNEDLIPVEDILITVTNNGYIKRMSLDNYKAQNRGG
VGITGIKMHEDDYVEHMAMTQTHDYHLFFTNKGRVYKIKGYQIPVGSRQAKGLPIINLLP
FEKDETLTSFTSVKDFDDQNQFLFFVTKKGIVKRTPVSDYKNIRTNGIIALTLREDDELL
SVRPTNGNKDIILGASNGKAIRFNEADVRSMGRTASGVKGMAIDEKDDIVGIALVENEDQ
EVLVVTENGFGKRTHVSEYRSQNRGGKGVKTLNVTEKNGKLATLRAVTDDQDLIVSSDKG
ITIRTHIAQIAETKRATQGVRIIKLRPDHKVATIALVPHQDEEEIVDPQIVTQEEIEIKD
EKKVVETVTLSATSEENIEEEKEVTQIDIFDKE
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgtcagaagaaataaaagatgattttgaaacaagtaaaacaactgaaggacatattaaa
gaagtaaacatttcatcagaaatgagaaaatccttcttaagttacgcaatgagtgttatc
gtttcacgtgctttaccagatattagagatggattaaaaccagttcaaagaagaattctt
tatggaatgaatgaactaggtgtttacagtaattcaagttataaaaagtcagccagaatt
gtaggggacgttatggggaaatatcaccctcatggtgactctagtatttatgaggcaatg
gtaagaatgtctcaagattttagttatagatatccgcttgttgatggtcatggtaacttt
ggatcaatcgatggtgatggggcagccgctatgcgttataccgaagctagaatgtctaaa
atcgctatggaaatgttaagagatattgataaaaacacaattgattttattgataactac
gatgccagtgaaaaagaaccagctgtcctaccagcaaggtacccaaatcttttagtaaac
ggatcaacagggattgcagtaggtatggcgacaaacatcccacctcatgacttaggtgaa
gtagttgatggtttattagcatatattgataataaagatattacagtagatgaattaatg
gaatacattaaaggaccagattttccaaccggaggacaaatccttggcttaagtggacta
agagctgcttatagaacgggtaatggtattatcgctattagagctaaagcagaaattcaa
acccataaaaataaaaatagtattgttgttactgaaataccatatcaagttaataaaaca
aaactaattgaaagaatcgcagaactagcaaaagataaaattattgaagggattacagac
ctaagagatgaatcaaaccgtaaaggaatgagaatcgttattgaattaagaagagatgta
aaccctcatgtaatgttaaataacttatacaaatatacacaacttcaagtatcatttggt
atgaacatgattgcccttgttaaaggtgaacctaaaacagtcactctaaaagatatgtta
gaaggatactttgaattccaaatggaagtcattcaaagaagaacacaatatgaattagaa
aaagcagaagctagaattcatattatcaatgccttagtaaaagctttaaacgatgttgat
agagcagttgaattaattaaaacttctaaagatggtgaagaagctaaacaaagattaatt
gaaacatacgactttgatgatatccaagctaaagctatcctagatatgagattacaaaga
ttaacaagtcttgaaatcttaaaaatcaaagatgaagctgaagaattaagaattaaaata
gaaggctataatgaaattattgcttctcatgaaagaaaagaagctatcatcaaagaagaa
atcacagaaattagaaacaaatatgatgatggaagaaaatcagaaatcaacctttatgaa
gatctagacattgataatgaagacttaatcccagttgaagatatcttaattacagttact
aataatggctatattaagagaatgtcgcttgataactataaagctcaaaatcgtggtgga
gtaggaattactggtattaagatgcatgaagatgactatgttgaacatatggcaatgaca
caaactcatgactatcatttattctttactaataaaggtagagtctataaaataaaagga
taccaaattccagttggatcaagacaagctaaaggactaccaatcattaaccttttacca
tttgaaaaagatgaaacattaacatcatttacgagcgtaaaagactttgatgatcaaaac
caattcttattctttgtcactaaaaaaggtattgttaaacgtaccccagtaagtgattat
aagaacattagaacaaatggtattattgccttaaccttaagagaagatgatgaactatta
agcgttagaccaacaaacggtaataaagatattatcctaggtgcttcaaacggtaaagct
atcagattcaatgaagcagatgtccgttctatgggacgtaccgcatcgggggttaaagga
atggctatagatgaaaaagatgatatcgtaggaattgctttagtagaaaatgaagaccaa
gaagtcttagtagttactgaaaatggatttggcaagagaactcatgtcagtgaatatcgt
agccaaaaccgtggaggtaaaggagttaaaacccttaatgttacagagaaaaatggtaaa
cttgccacactaagagctgtaacagatgatcaagatttaattgtttcatcagataaagga
attacaattagaactcatattgcacaaatagctgaaactaagcgtgctacacaaggtgtt
agaattattaaactaagacctgatcataaggttgctactatagcgttagttcctcaccaa
gatgaagaagaaatagttgatccacaaatagtaacacaagaagaaatagaaattaaagat
gaaaagaaagtagtagaaacagtaacactttcagcaacttctgaagaaaatatagaagaa
gaaaaagaagtaacacaaatagatattttcgataaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

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