KEGG   Alteracholeplasma palmae: BN85403110
Entry
BN85403110        CDS       T03096                                 
Symbol
hsdR
Name
(GenBank) Type I site-specific restriction-modification system, R (restriction) subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
apal  Alteracholeplasma palmae
Brite
KEGG Orthology (KO) [BR:apal00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:apal02048]
    BN85403110 (hsdR)
Enzymes [BR:apal01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     BN85403110 (hsdR)
Prokaryotic defense system [BR:apal02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   BN85403110 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 ResIII EcoR124_C HSDR_N DEAD NUDIX_2 AAA_22 DUF2314
Other DBs
NCBI-ProteinID: CCV63888
UniProt: U4KK49
Position
329907..332981
AA seq 1024 aa
MISQKNIKSVTELEFEQEVIDYLTNIGGVKQWEYKKEINNIDQLWDNFKNILEKNNQARL
NKPLSKQEFNQVKKVINNIKTPYEAGQFLYGVNGVSEIEVSLDDDRHVFLTVFDQSQVGG
GSTVYQIVNQIVSKPVISGRQERRFDVTLLINGLPIIQIELKKVLHNSNDSLSQMEQYIS
ERQYEGIYSTLQVLIAMTPYDIKYMANTTINQFNKEFAFNWQNENDSNPIRSWKEFSDKV
LSIPMAHELATRYMILDGTKNKECIKVMRPYQVYATKKVLDLVKKHDFSFSDGKLGYIWH
TTGSGKTITSFKTAWLTSKLPNVDKVIFLVDRIALTNQTVNAYKAYDPISGLTDKSGVIS
DTANVSDLHNKLNRKTDKNIIVTSIQKMSRYALRKDMKKGKQNILFIVDEAHRSTGDGSD
NKGMLEAIRREYPTAAWIGYTGTPKFPETSDVFGSLLHAYTIKDAIADKNVLGFNVEFKE
TIKAPENPSDEDIDDNIKESIYDRKDEHVELVVEDIFNNWRKRSNDRKYNALLTVHVGGN
KPSIPRAMQYFREFEKRNKEKPGADKIKVAISFSQDTSNGNNQLTNNNDLFYAIRAYNEI
FGTVFDMSTVKAYVDDVISRLNKTIDDRNYLDLVIVVDQLLTGFDAPELNTLYVDRTLKG
SSLIQAYSRTNRIHSAVNKPWGNVINYRWPNQNELEMNKAFAIYSNKDSANKQLTLDEYR
NSNQNDNIISKSFSDAKEELKEVVEELKNLTNDFKRVPASEREQNELFSKIREYNILLSK
LKQYSEDDNKNPISAYDNPEEFYNLIGMTEEKELILATVLAPELRSSRAKKENVDISEID
LEMIHIREIRIDYDYLIDLIAQLANEVYKTEWDKAEITKEKIDSEVAKSNNESEKRKVRK
FVSKIFSQEFEFDNYPVEANVEAISEAMNKMQKDENISIITQFIRDWGLDYSIGPKDLSL
LMEKHKIGQEDLDKQGEFTAIMNGAKDTYSSIASKDIAKLTWVKYRIELRKEFYKIADEI
KNNE
NT seq 3075 nt   +upstreamnt  +downstreamnt
atgataagtcaaaaaaatataaaaagtgtaacagagttagagtttgaacaagaagttata
gactacttaactaatataggtggagttaagcagtgggagtataaaaaggaaataaataat
attgatcagttatgggataactttaaaaatatacttgagaaaaataaccaggcaagattg
aataaacctctttctaaacaagaatttaatcaagttaaaaaagtaattaataatataaag
acaccttatgaagctgggcaattcttatatggagttaatggagtatcagagatagaggta
agtttagatgatgatagacacgtgtttttaacagtttttgatcaatcacaagtaggtggc
ggatcgactgtctatcaaattgtaaatcaaatagtaagtaaaccagttatatcaggaaga
caagaaagacgatttgatgtaaccttattaattaatggacttcctattatacaaattgag
ttaaaaaaagtattacataattctaatgattctttatcacaaatggagcagtatatttcg
gaaagacaatatgaaggaatatattcaacattacaagttttaatcgcaatgactccatat
gatataaagtatatggcaaataccacaataaaccagtttaataaagaatttgcatttaat
tggcaaaatgaaaacgactctaatccaattcgttcttggaaagaattttcagataaagta
ttgtcaatacctatggctcatgaattagcgacaagatatatgattttagatggtactaaa
aataaagagtgtataaaagttatgagaccgtatcaagtttatgctactaaaaaagtatta
gatttagttaaaaaacacgattttagtttttctgatggaaaactaggatatatttggcat
acaacaggaagcggtaaaacaataacaagttttaaaacagcttggttaactagtaaacta
ccaaatgtagataaggttatttttttggttgatagaattgctttgactaatcaaacagtt
aatgcctataaagcctatgaccctatatctggattgactgataaaagtggtgtaattagt
gatacagctaatgtttctgatttacataataagctaaatagaaaaacagataaaaatata
attgttactagcattcaaaaaatgtctagatatgcattaagaaaagacatgaaaaaagga
aaacaaaatattttatttatagttgatgaagctcatagatcaacaggtgatggatctgat
aacaaaggtatgttagaggctataagacgtgaatatcctactgcagcatggataggatat
actggaacacctaaattccctgaaactagcgatgtttttggttctctattacatgcatac
acaattaaagatgctattgcagataagaatgtcttaggtttcaatgttgaatttaaagag
actattaaagcgcctgaaaatccttctgatgaagatattgatgataatattaaggaaagc
atatatgatagaaaagatgagcatgtagagttagttgtagaggatatttttaacaattgg
cgtaaacgttcaaatgataggaaatataatgcattattaacagtacatgttggaggaaac
aaacctagtattcctagagctatgcaatactttagagaatttgaaaagagaaataaagaa
aaaccaggtgcagataaaataaaagttgcaattagtttctcacaagatacatcaaatgga
aataatcaacttactaacaataatgatttattttatgctatccgtgcatataatgaaata
tttggaacagtttttgatatgagtacagttaaggcatatgtagatgatgtgatcagtcga
ttaaataagacaatagatgacagaaactatttagatttagttatagttgtagatcagcta
ttaacaggttttgatgcgccagagttaaacacactttatgttgatagaacattaaaaggc
tcaagcctaatacaagcatactctagaacaaatagaatacatagtgcagtaaataagcct
tggggaaatgttattaattatagatggcctaatcaaaatgagttagaaatgaataaagca
tttgcaatatattctaataaagattctgctaataaacaattgacattagatgaatataga
aacagtaatcaaaatgataatattatttcaaaaagttttagtgatgctaaagaagaatta
aaagaagtagttgaagaactcaaaaacttgactaatgattttaagcgtgttccagccagt
gagagagaacaaaatgaactttttagtaaaattagagagtacaatattttattaagcaag
cttaaacaatattctgaagatgataataaaaatccaatttccgcttatgataatcctgaa
gagttttataatttaatcggtatgactgaagaaaaagaattgatacttgcgactgtttta
gcaccagaacttagaagcagtagagctaaaaaagaaaatgtagatatctcagaaatagat
ttggaaatgatacatataagagaaataaggatagattatgattatttaatagaccttatt
gcccaactagctaatgaagtttataagacagaatgggataaagcagagataactaaagaa
aaaattgattctgaggttgctaaatcaaataatgaaagtgaaaaaagaaaagttagaaaa
tttgtatctaagatattttctcaagagtttgagtttgataattatcctgtagaagctaat
gttgaggctatttctgaagcaatgaataaaatgcagaaagatgaaaatattagcataata
actcaatttattagagactggggtcttgattatagcattggaccaaaggatctgagttta
ttaatggaaaagcataaaataggtcaagaagacttggataaacaaggtgagtttacagct
attatgaatggtgctaaagatacttatagttccattgcaagtaaagatattgcaaaatta
acatgggttaagtatagaattgaacttagaaaagaattttataaaattgcagatgaaatt
aagaataatgagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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