KEGG   Alteracholeplasma palmae: BN85409220
Entry
BN85409220        CDS       T03096                                 
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
apal  Alteracholeplasma palmae
Pathway
apal03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apal00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    BN85409220 (pnp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apal03019]
    BN85409220 (pnp)
   03016 Transfer RNA biogenesis [BR:apal03016]
    BN85409220 (pnp)
Enzymes [BR:apal01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     BN85409220 (pnp)
Messenger RNA biogenesis [BR:apal03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     BN85409220 (pnp)
Transfer RNA biogenesis [BR:apal03016]
 Prokaryotic type
  tRNA degradation factors
   BN85409220 (pnp)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 PNPase KH_1 TypeIII_RM_meth SPATA25
Other DBs
NCBI-ProteinID: CCV64499
UniProt: U4KKZ2
Position
complement(1019913..1022063)
AA seq 716 aa
MEKKIFETTFGGRPLRVEIGEVAKQANGSALIYYGDTVVLSTAVSKNVASTADFFPLMVI
YQEKLYAAGKIPGGFLRREGRPSEHETLTSRLIDRPIRPLFEEGFRNEVQVVNTVLSSDA
VNPSEMASIIGSSVALCISDIPFLGPIAGVTVGRIDNEFVINPTPEQLEKSDLELIIAGT
KTAINMVEAGAKEISEEIMLEAILFGHEEIKKMCEFQEELIKAINPTKVTPDLFQIDETI
SQLVSSKYEKSLVKAVSIFDKLERYEAIDKLKAEAIDEFGKKSFFKDIDGVKVFDSEAQS
SYLSQVARVVDAIVTKEVRRLITEDKVRPDGRKVDEIRQLTSKVDLLPRTHGSALFTRGQ
TQSLGVVTLGSLGENQIIDGLGEEGTKRFMLHYNFPPFSVGETGRYGAPGRREIGHGALG
ERALLQVLPSEEDFPYSIRIVSEILESNGSSSQATICSGTMALMAAGVPIKAPVAGIAMG
LIMDGKNYTILTDIQGMEDHEGDMDFKVAGTKDGITALQMDIKISGITKEILKEALEQAK
KGRLHILNHMLETISEVRPELSEYAPKVKMIKVNPDKIRDIIGAGGKIITQIIEDHDNVK
IDIEQDGRVFIMHSNSQIIKDTAEYIQNLIKEAKVGEIYEAKITRLLMDKQGKSAGAFAE
LWPGTEGLIHISKLANERVEKVEDVVSIGDVVLVKCIKIDEKGRIDLSRKDALDKK
NT seq 2151 nt   +upstreamnt  +downstreamnt
atggaaaagaaaattttcgaaacaacttttggtggtagaccattaagagttgaaattggt
gaagttgctaaacaagcaaacggatcagcattaatttattatggagatacagttgtttta
agtacagctgtttcaaaaaatgttgcaagtacagcagattttttcccattgatggttata
taccaagaaaaattatatgcagctggtaaaatcccaggtggatttttaagaagagaaggt
agaccttctgaacatgaaacacttacatcaagactaattgatagaccaattagaccactt
tttgaagaaggttttagaaatgaagttcaagttgtaaatactgtattaagtagtgatgca
gtaaatccaagtgaaatggcatctattattggttcatcagtagctttatgtatttctgat
atcccatttttaggaccaattgctggtgttactgttggtagaattgataacgaatttgtt
attaacccaactcctgaacaattagaaaaatcagatttagaattaattatcgctggaact
aaaacagctattaatatggttgaagctggtgctaaagaaattagtgaagaaattatgtta
gaagctattctttttggacatgaagaaattaaaaaaatgtgtgaattccaagaagaatta
atcaaagcgattaaccctacaaaagtgacaccagatttattccaaattgatgaaacaatt
agtcaattagtatcatctaaatatgaaaaatcattagttaaagctgtttcaatctttgat
aaacttgaaagatatgaagcaatagataaattaaaagcagaagcaatagatgaatttggc
aaaaaatctttcttcaaagacattgatggagtaaaagtatttgatagtgaagctcaaagt
tcatatttaagccaagttgctagagttgttgatgcaatcgttacaaaagaagtaagacgc
ttaatcactgaagataaagtaagacctgatggacgtaaagttgatgaaatcagacaatta
acatcaaaagttgatttattaccaagaacacatggttctgcattatttactagaggtcaa
acccaaagtttaggtgtagtaactttaggatctttaggtgaaaatcaaattattgatgga
cttggtgaagaaggaactaaaagatttatgttacattataacttccctcctttctcagtt
ggagaaacagggcgttatggtgctcctggacgtcgtgaaattggacatggtgccctaggt
gaaagagcattattacaagtattacctagtgaagaagatttcccatactcaattcgtatt
gtatcagaaatcttagaatctaatggttcttcatcacaagcaaccatctgttcaggaaca
atggcattaatggctgcaggtgttccaattaaggctccagttgcaggaattgctatggga
cttattatggatggtaaaaactatacaatcttaacagatattcaaggtatggaagaccat
gaaggagatatggattttaaagtagctggtactaaagatggtattactgctttacaaatg
gatatcaaaatctcaggaattacaaaagaaatcttaaaagaagcattagaacaagctaaa
aaaggcagattacacattttaaatcatatgttagaaacaatcagtgaagtaagacctgaa
ttatcagaatacgcacctaaagttaagatgattaaagttaacccagataaaattcgtgat
attattggtgcaggtggtaaaatcattactcaaattattgaagatcatgacaatgttaaa
attgatattgaacaagatggtagagtatttatcatgcattcaaattctcaaattattaaa
gatacagcagaatatattcaaaacttaattaaagaagctaaagttggagaaatatatgaa
gctaaaattacaagattattaatggataaacaaggaaaatctgctggtgctttcgctgaa
ttatggccaggaactgaaggattaattcatatatcaaaacttgctaacgaacgtgttgag
aaagttgaagatgttgtttctattggtgatgttgtattagttaaatgcattaagattgat
gaaaaaggaagaattgatttatcaagaaaagatgctttagacaaaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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