KEGG   Aeropyrum pernix: APE_0496.1
Entry
APE_0496.1        CDS       T00023                                 
Symbol
rnhB
Name
(GenBank) ribonuclease HII
  KO
K03470  ribonuclease HII [EC:3.1.26.4]
Organism
ape  Aeropyrum pernix
Pathway
ape03030  DNA replication
Brite
KEGG Orthology (KO) [BR:ape00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    APE_0496.1 (rnhB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ape03032]
    APE_0496.1 (rnhB)
Enzymes [BR:ape01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     APE_0496.1 (rnhB)
DNA replication proteins [BR:ape03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    RNase H
     APE_0496.1 (rnhB)
   Elongation factors (archaeal)
     APE_0496.1 (rnhB)
SSDB
Motif
Pfam: RNase_HII
Other DBs
NCBI-ProteinID: BAA79461
UniProt: Q9YET5
Position
344887..345564
AA seq 225 aa
MGIVVGVDEAGRGSLVGDLVVAGFAVEEARLGELQSLGVRDSKQLSPAARVELYREISGV
GFFTVEAIRPWEIDGENINILVTKAVEEIVSRIVSYLGVHPSLVVVDKYGDVQGLRLALT
RLGIEPRSILVEEKADSRYPVVSAASIVAKVVRDARLQVLRRMYGVRGSGYPSDPETREW
VREVFARGEAPRVIRYTWSTVRKLGGPWRSKKAGRNRSLDEFLGG
NT seq 678 nt   +upstreamnt  +downstreamnt
ttgggcatagtcgtcggcgtggatgaggctggcaggggaagcttagtcggggatctcgtt
gtggcgggcttcgcggttgaagaggcgaggttgggcgagctgcagagcctaggtgttagg
gatagtaagcagctcagccctgcggcgagagtggagctctaccgggagatctctggtgta
ggcttcttcacagtggaggctattaggccttgggagatagacggggagaacataaacatt
ttggtcacgaaggctgtggaggagatagtgtccaggatagtatcatatctcggagtccac
ccctcccttgtggtggtggacaagtacggcgacgtccagggcctcaggctcgctctaacg
aggctgggcatagagcccaggtctatattggtggaggagaaggcggactcgaggtatccc
gtggtttctgcagcgagtatagtggccaaggtcgtcagggatgcaaggctccaggtcctg
aggcgcatgtatggggtcaggggtagcggctaccccagcgaccctgagacccgggagtgg
gtgagggaggtgttcgcccggggtgaggcgcccagggttatcaggtacacttggtccaca
gtcaggaagctggggggcccctggaggagtaagaaagccgggaggaaccggagtctggac
gagttcctgggaggttag

  All links  
Gene (6)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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