KEGG   Acetobacter pasteurianus IFO 3283-12: APA12_19490
Entry
APA12_19490       CDS       T01814                                 
Name
(GenBank) DNA polymerase III alpha subunit
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
apg  Acetobacter pasteurianus IFO 3283-12
Pathway
apg03030  DNA replication
apg03430  Mismatch repair
apg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:apg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    APA12_19490
   03430 Mismatch repair
    APA12_19490
   03440 Homologous recombination
    APA12_19490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apg03032]
    APA12_19490
   03400 DNA repair and recombination proteins [BR:apg03400]
    APA12_19490
Enzymes [BR:apg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     APA12_19490
DNA replication proteins [BR:apg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     APA12_19490
DNA repair and recombination proteins [BR:apg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     APA12_19490
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon HROB T2SSK Rrn6_HB
Other DBs
NCBI-ProteinID: BAI21345
Position
complement(2123756..2127175)
AA seq 1139 aa
MSYADFIHLRVHSAYSLSQGAIRVPDIAGLAKEMYMPAVGIADSGNLFGALEFSQYCTKS
GIQPIIGSQIGLPARNDKPGAPAEPVVLLAQNEAGLANLQFLSSAGFQNSDPADPFVSLD
LLCEKAEGLLLLTGGSRGPLFQMLAEGQTEDAEKWLARVHEAFGDRLIVELHRHGLAIEK
AVEPGVLTLADRFGLPLVATNECFFPTPEMYEAQDALLCIAQGRTMAEKDRFRVTPEHWF
KPPEMMRALFADLPDACDNTLEIARRCAIKVETRKPLLPVCPKVREGATEDETLRAMAWE
GLERRMSGMKLDAETIEKYKERLRFELDIISKMGFPGYFMIVADFIQWAKAHGIPVGPGR
GSGAGSLAAWALTITDIDPIPFNLLFERFLNPERVSMPDFDIDFCQDRRDEVIAYVRREY
GADRVAQIITFGKLQARAAVRDVGRVLGLPYGMVNRVAELIPNNPAKPVTLKEAIAGEPK
LQEMRDNDEALRRLLEIAQQLEGLFRHASTHAAGVVIGDRPLVQLVPLYRDPKSDTLVTQ
YNMKFVEQAGLVKFDFLGLTTLTILKRGVDFIRRMGKDVDLSHIPLDDPKTYEMLGRGDT
AGVFQFEGAGMRDVLKQMRPTRIEDLIAAVALYRPGPMANIPDYCRRKHGEAWEPPHEEI
RDILEETYGIMVYQEQVMQIAQKMAGYSLGGADLLRRAMGKKIRSEMDHQREIFTEGATK
RGIDRDKAVEVFDLMAKFADYGFNKSHAAAYAFVSYQTAWMKANHPVAFLAACMSLARER
TEKLAALRQEAERMHIAVLPPNINKSEADFSVEEQPDGTYAIRYALAAIKKVGYGAMESL
VEARGEKPFKNLADFAIRIDPKHINRMQLENLAKAGAFECIDKNRARVFRSADVILRRAH
SQAQEAASGQIGLFGGPGEVEPLRLVEGHDWPEFERLAMEAEAIGFHMTAHPLDAYGSVL
RRLGVTRTSQLLTAAELGGGRVKIAGCVVDKKERPTRTGNKMAWVRLSDASGGCEVTVFS
EVLTRVRDILVAGTAILVTADLKLEGEALRLTATDIVDLEAAAAQGQSEMRVWLEKPDAL
PDLQAILEPQKGGAGRIVLLPGVADSCDVEVRLRGRYKVTPVLGQRLRTLSGVSRVEQV
NT seq 3420 nt   +upstreamnt  +downstreamnt
atgtcttacgctgattttatccaccttcgtgttcactctgcctattcgcttagccagggg
gccattcgtgtgcccgatattgcggggctggcgaaggaaatgtatatgcctgctgtgggt
attgcagattcaggcaatctgttcggagcgttggaattttctcagtattgtacaaaaagc
ggtattcagcccattattggcagccagattggcttgcctgcgcggaatgacaagcccggt
gctccagccgaaccggtcgtgcttctggcgcagaatgaagcaggcttggccaatcttcag
tttctttcttccgccgggtttcagaactcagatccagcagatccttttgtctccctagac
ctgctgtgtgaaaaagcagaggggttgctgctgctgaccggtggctcacgtggcccactt
ttccagatgctggccgaagggcaaacggaagatgccgaaaaatggctggcccgtgtgcat
gaggcatttggtgacaggctgattgtagaactgcaccgtcatggtctggctattgaaaaa
gctgtggaaccgggtgtgctgacattggctgaccggtttggtctgcctttggtggccacc
aatgaatgcttttttcctacgccagaaatgtacgaagcgcaggatgccctgttgtgcatt
gcccaagggcgcaccatggcagaaaaagatcgctttcgtgttacgccggaacattggttc
aagccgccggaaatgatgcgcgcactttttgcggatctgccagatgcgtgtgacaacacg
ctggaaattgcgcgccgctgcgccattaaggtggaaacccgcaaaccacttctgcctgtc
tgccccaaggtaagagaaggcgcgacagaagatgaaaccctgcgcgctatggcgtgggaa
gggttggaacgccgcatgtccggcatgaagctggatgcggaaactatagaaaaatacaag
gaacgtttgcgtttcgagctggatatcatctccaagatggggttccccggttacttcatg
atcgtggcggactttatccaatgggccaaggcgcatggtattccggttgggccgggccgt
ggttctggtgcggggtccttggccgcatgggcgcttaccatcacagatattgaccccatt
ccgttcaatctgctgttcgaacgttttctaaacccagaacgcgtttccatgcctgacttt
gatatcgatttctgtcaggacaggcgagacgaagtgattgcctatgtgcggcgtgaatat
ggggcagatcgcgttgcgcagattattaccttcggtaagctgcaagcacgcgctgctgtg
cgcgatgttgggcgtgtgttggggttgccatacggtatggttaaccgcgtggcagagctt
attcccaataacccagccaagccggttaccctgaaggaagctatcgcaggcgagcctaaa
ctgcaggaaatgcgtgataatgatgaggccctgcgcaggttgctggaaattgcccagcag
ctggaagggcttttccgtcatgccagtacgcatgcggcgggggtggttattggggatagg
ccgcttgtgcagcttgtgccgctgtaccgagaccccaaaagtgacacgctggttacccag
tataacatgaagtttgttgagcaagcgggcctcgtcaagttcgactttcttggtttaaca
acacttaccatcctgaaacgcggtgtcgatttcatccgccgaatgggcaaggatgtagac
ctcagccacattccgctggatgaccccaaaacgtatgaaatgctggggcggggtgatacc
gctggcgtgttccagtttgaaggcgcgggtatgcgcgatgttcttaaacagatgcgccca
acccgaatagaagatttgattgcagctgtggcgctgtatcgccccggcccaatggccaac
attcccgattactgccgtagaaaacacggtgaggcatgggaacccccgcacgaggaaatt
cgcgatattcttgaagagacctatggcatcatggtctatcaggaacaggttatgcagatt
gcccagaaaatggctggttatagcctaggtggcgcagatttgttgcgccgagccatgggt
aaaaagatccgttcggaaatggatcatcagcgtgaaatctttacagaaggcgcaaccaaa
cgcgggattgaccgtgataaggccgttgaggtgtttgaccttatggctaagtttgcagac
tatggttttaacaaatcccatgctgctgcttatgcttttgtgtcttaccaaacagcatgg
atgaaggctaaccatccggtggcctttctggcagcctgtatgtctctggcacgggagcgc
acggaaaaacttgccgctttgcggcaggaagcagagcgcatgcacattgctgttctgccg
ccgaatattaataaatcagaagctgatttctcggtcgaggaacagcctgatggcacatat
gcaatccgttatgcgctggctgccattaaaaaggttggctatggcgcaatggaatctctg
gtagaagcaaggggagaaaaaccctttaaaaatttggcagattttgcaatccgtattgac
ccgaagcacatcaaccggatgcagttggaaaacctggcaaaagccggtgcgtttgaatgt
attgataaaaaccgggcacgtgttttcaggtctgcagatgttatcttgcggcgtgcgcat
agccaagcgcaggaggctgcttctggccagatcgggttgtttggcgggccgggtgaagtt
gaacctttgcggctggtggaaggacatgattggccagaatttgaacgtctggcgatggaa
gccgaagctattggcttccatatgacagctcacccgctggatgcgtatggttctgtgctg
cggcgtctgggtgttacccgcacatcgcagttgctgacagcggcagaactgggtggtggc
cgtgttaaaattgctggctgtgtggtggataaaaaggaacgtcccacacgcacaggcaat
aaaatggcatgggtacgcctgtctgatgcttctggcggctgcgaagtaactgttttttcg
gaagtgctaacacgtgtgcgcgatattctggtggcgggcacggctatactcgtaacggct
gatttaaagctggaaggggaagcactgcgtcttaccgctacagatattgtggatttggaa
gcggctgcagcgcaagggcaaagcgaaatgcgggtatggctggaaaagccagatgccttg
ccagatttgcaagctattctggagccgcaaaagggtggggcagggcggattgttctgctg
ccgggggttgctgatagttgtgatgtagaggtgcggttgcgtgggcgctataaggtgaca
cctgtattggggcaaaggctgcgcacactttctggtgtttcacgggtagaacaggtctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system