KEGG   Acetobacter pasteurianus IFO 3283-12: APA12_41760
Entry
APA12_41760       CDS       T01814                                 
Symbol
recD_traA
Name
(GenBank) DNA helicase RecD/TraA
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
apg  Acetobacter pasteurianus IFO 3283-12
Pathway
apg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:apg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    APA12_41760 (recD_traA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apg03400]
    APA12_41760 (recD_traA)
Enzymes [BR:apg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     APA12_41760 (recD_traA)
DNA repair and recombination proteins [BR:apg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     APA12_41760 (recD_traA)
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 HHH_2 Helicase_RecD PIF1 nSTAND3 MeaB NTPase_1 RsgA_GTPase AAA_16 T2SSE AAA_29 DEAD AAA_22 SLFN-g3_helicase UvrD-helicase ABC_tran ATP_bind_1 AAA_28 AAA IstB_IS21 cobW ABC_ATPase NACHT TsaE MMR_HSR1 AAA_24 AAA_23 MobB NB-ARC TrwB_AAD_bind
Other DBs
NCBI-ProteinID: BAI22230
Position
pAPA12-014:complement(184383..186602)
AA seq 739 aa
MTSAVVGEQCQTEALAGLVERVTFHNAENGFCVLRVKVRGQRDLVTVVGHAAMISAGEFV
QMSGRWFNDHTHGLQFKAEFLKASPPTTVEGIERYLGSGMIRGIGPVYAKKLVKAFGEAV
FDLIEQEPHRLREVTGIGPKRAERIVGGWADQKVIREIMLFLHSNGVGTSRAVRIFKTYG
QDAVRLISENPYRLAKDIRGIGFKTADQIARKMGIAPDAMIRVRAGISYALGEAMDEGHC
GLPVGELLTSTAELLEVAAPLIETALALELEAGDVVADSVGETSCIFLAGLYRAEQSIAE
RLRACAVGRPPWPEIDAEKAMTWVEGKTGLAMAPSQQEAVRLALRSKVLVITGGPGVGKT
TLVNAILKIVTAKGTDVQLCAPTGRAAKRLSESTGLEGKTIHRLLETDPGNGSFKRDDTN
PLTCDLLVVDEASMVDVLLMRSLLRALPDSASLLIVGDVDQLPSVGPGQVLADIIGSDAV
PVVRLTEVFRQAAQSRIITNAHRINEGKMPELSAEEGSDFYFVEAAEPEVGLRKLLAVVK
DRIPARFGLDPVRDVQVLCPMNRGGLGARSLNIELQQALNPAGDVKVERFGWTYGPGDKV
MQIANDYDRDVFNGDLGVIDKIDVEEGELTVLFDGREVVYGFGELDELVLAYATTIHKSQ
GSEYPVVVIPLVTQHYTMLARNLLYTGVTRGRKLVVLVGQKKALAIAVRNQGGRLRWSKL
RDWLVGTSGTGHLSRLKKP
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgaccagtgccgtggttggagaacaatgccaaacggaagcgctggccggcctcgtggag
cgggtgacgttccacaatgccgagaacggtttctgcgtcctgcgggtgaaggtgcggggg
cagcgcgatctggtcactgtcgtcggccatgccgccatgatctcggcgggtgagttcgtg
cagatgtcggggcgctggttcaacgaccacacccacggcttgcagttcaaggcggagttc
ctcaaggccagtccgccgaccacggtcgaaggcatagagcgctatctcggctcgggcatg
atccggggcattggtcccgtctatgccaaaaaactggtgaaagcgttcggcgaggccgtg
ttcgacctgatcgagcaggaaccgcatcgcctgcgggaagtgacaggcattggtcccaag
cgggccgaacggattgtcggtggctgggcagaccagaaggtgatccgcgagatcatgctg
ttcctgcacagcaacggcgtcggcacgtcgcgggcggtacggatcttcaagacctacggg
caggatgcggtcagactgatcagcgagaacccctatcggttggcgaaggacatccggggc
atcggcttcaaaaccgccgaccagatcgcccggaagatggggatcgcgcctgatgccatg
atccgggtgagggccgggatctcctatgcccttggtgaggcgatggatgaagggcattgc
ggcctcccggtcggtgaactcctgaccagcaccgccgaactgctggaggtcgccgcccct
ctgatcgaaacagccctcgcgctggagctggaagcgggagacgtggtcgctgatagcgtg
ggagagacgagttgcattttcttggctggtctctatcgcgcggagcagagcatcgccgag
cgattgcgcgcctgcgccgtgggtcggccgccctggccggagatcgatgctgaaaaggcc
atgacttgggtggaaggcaagaccggacttgccatggcgcccagccagcaggaagcggtg
cgccttgcactgcgtagcaaggtgctggtgatcacgggtggtcctggcgtgggcaagacc
acgctggtcaacgccattctgaagatcgtgactgccaagggcacagacgtgcaactttgc
gcgccgaccggccgggcggcgaagcgcctgtcggaaagcacggggctggaaggcaagacc
atccatagactgctggagacggatccgggcaatggcagtttcaaacgggacgataccaac
ccgctgacctgcgacctgctggttgtggacgaggccagcatggtcgacgtgctgctgatg
cgctccctgctgcgcgcgttacctgacagcgcgtctctgctgatcgtcggcgacgtggac
cagttgccttctgtcggaccggggcaggtgctggccgatatcattggctccgatgctgtc
cctgtggtgcgcctgaccgaggtgttccgccaggcggcacagagccggatcatcaccaac
gcgcaccggatcaacgaagggaagatgccggagctgagcgcggaagagggatcggatttc
tatttcgtggaggcggctgagcccgaggtcggactgcgcaagttgctggccgtggtgaag
gaccgcatcccggcgcggttcgggctggacccggtccgcgacgtgcaggtgctctgcccg
atgaaccgaggtgggctgggcgcacggtcgctgaatatcgagttgcagcaggcgctgaac
ccggcaggcgacgtgaaggtcgagcggttcggctggacctacggtcccggcgacaaggtg
atgcagatcgccaacgattatgaccgggacgtcttcaacggggatctcggcgttatcgac
aagatcgatgtggaagagggcgaactgacggtcttattcgatggacgggaggtcgtttac
ggcttcggcgagttggacgaactggtgctggcctacgcgacgaccattcacaagagccag
ggctcggaatatccggtagtggtcatcccgctggtgacgcagcattatacgatgctggcg
cggaacctgctttataccggtgttacacgggggcggaagctcgtcgtgctggtcgggcag
aagaaggctctggccatagctgtgcgaaatcagggcggaaggctacgttggtcaaaactg
agagactggctggtgggtacgtcaggtacaggtcatctatcccgcctaaagaaaccttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (37)   
   Pfam (37)   
All databases (46)   

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