KEGG   Acyrthosiphon pisum (pea aphid): 100161191
Entry
100161191         CDS       T01076                                 
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03022  Basal transcription factors
api03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    100161191
  09124 Replication and repair
   03420 Nucleotide excision repair
    100161191
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:api03021]
    100161191
   03400 DNA repair and recombination proteins [BR:api03400]
    100161191
Enzymes [BR:api01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     100161191
Transcription machinery [BR:api03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     100161191
DNA repair and recombination proteins [BR:api03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     100161191
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_34
Other DBs
NCBI-GeneID: 100161191
NCBI-ProteinID: XP_001950547
APHIDBASE: ACYPI002433
UniProt: A0A8R2A4T9
Position
A3:25069465..25074719
AA seq 750 aa
MGLDDPVLLAVNEEEGLPSAAKKNAETAINSVEDEFGAKDYRSQMNLKTDHASRPLWVAP
DGHIFLESYSPVYRHAHDFMIAIAEPVCRPTHLHEYKLTAYSLYAAVSVGLETNDIIEYL
KRLSKTSIPDGIIEFITVCTLSYGKVKLVLKHNRYFIESQHPDILQKLLKDPVIGSCRLK
RLEDTDALITEEQKIEKSHFPGDTSKDKEDHLNDVVPKDITDLYEKIDKVEEEEEEKTQN
LVSFEVQQEKIEIIQKRCIEIDTPLLVEYDFKNDKVNKDINIDLKPQATLRPYQEKSLRK
MFGNSRARSGIIVLPCGAGKSLVGVTACCTVRKRALVLCNSAVSVEQWKYQFKMWSTADD
SLVCRFTSDVKDKLMGCGVFITTYSMITHTQKRSWEAEQTMKWIQEQEWGIMVLDEVHTI
PAKMFRRVLTLVQSHCKLGLTATLLREDDKIADLNFLIGPKLYEANWLELQQRGYIAKVQ
CSEVWCPMAPEFYREYLATRTCKKMLFFVMNPNKFRACQFLIRYHEQRGDKTIVFSDNVF
ALKEYALKLSKPYIYGPTSQAERIQILQNFKLNPKVNTIFVSKVADTSFDLPDANVLIQI
SSHGGSRRQEAQRLGRILRAKKTAIAEEYNAFFYTLVSQDTMEMSYSRKRQRFLIDQGYS
YKVVTKLAGMDEDPELFYSSREDQGLLLSKVLAANDTDADEERMPYEGTSKSYKKMSGKM
SSMSGADDAVYAEFRRNSGVKHPLFKKFRK
NT seq 2253 nt   +upstreamnt  +downstreamnt
atgggtttggatgatcctgtgttattagctgttaacgaagaagagggtttaccaagtgct
gctaaaaagaatgctgaaactgctattaacagtgttgaggatgagtttggagctaaagac
tatagatcacaaatgaatctaaaaacagatcacgcatctcgaccattatgggttgctcct
gatggacatatatttcttgaatcgtattcccctgtgtatcgccatgctcatgactttatg
attgctattgccgaaccagtttgtagaccaactcatttacatgaatataaattaactgca
tattcattgtatgcagctgttagcgttggattagagactaatgacataattgaatacttg
aaacgtttgagtaagactagtatacctgatggtataatagagtttataactgtgtgtaca
ctttcttatggaaaagttaaacttgtacttaaacataatcgatacttcattgaatcacaa
catccagatattttacaaaagcttcttaaagatcctgttattggttcttgtcgtcttaaa
aggctggaggatacggatgcattgatcacagaagaacaaaaaattgaaaaatcacatttt
cctggagatacttcaaaagacaaagaagatcatttgaatgacgtagttccaaaagatata
acagatttatatgagaaaattgataaagttgaagaagaagaagaagaaaaaacacaaaat
cttgtatcatttgaagtacaacaagaaaaaattgaaatcatacaaaagcgttgtatagag
attgatacacctctgttagttgaatacgattttaaaaatgacaaagtcaataaagacatt
aacatagatttaaaacctcaagcaactttaagaccttatcaagaaaagagcttaagaaaa
atgtttggaaatagtcgtgcaagatcaggaattattgtgttaccgtgcggagcgggaaaa
agtttggtaggtgtaacagcttgttgtactgtacgtaaacgtgcgttagtcctatgcaat
tcagcggtttctgttgaacagtggaagtatcaatttaaaatgtggtctacagctgatgac
agtttggtatgcagatttacatccgatgttaaggacaaattaatgggttgtggtgtgttt
attacaacttattcaatgataacacatacacaaaagagatcttgggaagctgaacaaaca
atgaaatggattcaagagcaagaatggggtataatggtgttggatgaagtacataccata
ccagctaaaatgttccgacgtgtattaacacttgttcaatcacattgcaaattgggctta
acagccacattattaagagaagatgataaaattgctgatttaaattttttaattggtcct
aaactatatgaagctaattggttggaattacaacaaagagggtacatagccaaagttcaa
tgttcagaagtatggtgtccaatggctccagaattttatcgtgaatatttagctactaga
acatgtaaaaaaatgcttttttttgtgatgaatcccaataaatttcgtgcttgtcaattt
ttaatacgttatcatgaacaacgaggagacaaaactattgtattctctgataatgtattt
gcacttaaagaatacgccttaaagttaagtaaaccatatatttatggaccaacatctcag
gcagagagaatccaaatattacaaaattttaaattaaatccaaaagtgaataccatattt
gtcagtaaagttgcagatacatcatttgatttaccagatgccaatgttcttatacaaatt
tcctctcatggtggaagtcgacgtcaagaagcgcaacgtctgggtcgtatcttacgtgct
aaaaaaactgcaattgctgaagaatataacgcattcttctatacccttgtgtcacaagac
acaatggagatgagctactcaagaaaacgacaaagatttcttatcgatcaaggatacagt
tataaagtggttacgaaacttgctggaatggatgaggatccagagctattttattctagt
agagaagatcaaggtttattattaagtaaagtcttagcagccaatgacacagatgcagat
gaggaacgaatgccatatgagggtacatccaagtcctataagaaaatgtctggtaaaatg
agttctatgtctggtgctgatgatgcggtgtatgcagaattcagaagaaattctggcgta
aaacatcctttgttcaaaaaattcagaaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (25)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APHIDBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (7)   
   Pfam (7)   
All databases (52)   

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