KEGG   Acyrthosiphon pisum (pea aphid): 100162870
Entry
100162870         CDS       T01076                                 
Name
(RefSeq) transcriptional regulator DEF1
  KO
K14323  protein CASC3
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03013  Nucleocytoplasmic transport
api03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    100162870
   03015 mRNA surveillance pathway
    100162870
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100162870
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100162870
SSDB
Motif
Pfam: Btz
Other DBs
NCBI-GeneID: 100162870
NCBI-ProteinID: XP_001952339
APHIDBASE: ACYPI003992
UniProt: A0A8R2A7H5
Position
X:complement(79341548..79347194)
AA seq 945 aa
MESTAVNVKEEDTVAKVAVATIAASDAANSIAVTDEIVPPIKLDKEIIMTTDNVEHVVVS
EQADVSNETAITVNATSNKEDQLNIAMASTTISTNEVDEIKHNLGDTVLDKQQKPATATV
EKDIVINETSDINLDISLKTKSESDEIYNSTMGSVFEDAVEYIINDEEDNVQEQPQDVIQ
EENVPDDESGSQQEVEGGDGEEDYDEETKDPAAPAEPVVPVPVDDDTNDPQYIPRRGRFY
EHDDRMAYSTTSSEGSESDNGYEEDSGDDDGVSDRRRVRRRHTSIKKQKSVTPVDTAENT
ALAVVDGSLSTKKVLAISKVAATTKDSETAVTADGLAKKLSVGSRKSRDLDALDRWTHDL
YDENEQTRKSRDELLASYGYDIREESEAPRARRHHKYGRAATTKYTRSWQDTKAYIGAAG
GQQSMKVKRGGMARRNVGGLNKNINKSTTDEYTSEFPALDDTKKSVPNTSTLPSTESSAV
VEVSDQNHEQQLKSLSVQNEDKKSVAAVVETSQARHHTSSSRATPKYNTTSPTNRNNRQD
QNGGPSSSSTNNKNYYNRSSTESPISKEKGAQVNRDSPSSAANSNFFNRRPQQNSSGHTQ
HHNYKQQHYNSSQHNQQHQNSSPSGPRSRNFHQHQTSQQYNRDRYFSKGATPSSSSSSNQ
HNYDQQHHSGVPTTAGTGRTQHGGGHYQHYNNRQYENENQPIDPPVPPTPVVRSSKRYSV
QSRRELPDPVLNFGGLSKTPQPQPPAPQQQNGLVMQDQQMQPTPQQLQQQQPIQIHQQPP
PLLPQYHQPLQQIHHGMVLDHNTGMMVMAAADPTMYHHQMYATPQYATGVAPGPAAGSAD
DQNAAAAAAAAALQMLAAQAAVYQPVPTGATGVTSPPSGTQSLQQPETFMTTYYQPQQQP
QQQPPPRRVNLAIPIVAPPPEPNQQQGNLKTNLSTTPPPTTASAN
NT seq 2838 nt   +upstreamnt  +downstreamnt
atggagagtactgccgtcaacgtgaaagaagaagacactgtcgcaaaagttgctgttgcc
accattgccgctagcgatgcggcgaattccatagcagtgactgatgaaattgttccaccc
attaagttagacaaggaaatcattatgaccactgataatgttgaacatgtggtggtcagt
gaacaagcggatgtgtcaaatgaaactgcaattaccgttaacgccactagtaacaaagaa
gatcaattaaatatagccatggcatctacaacaatatcgactaatgaggtagatgagatt
aaacacaatctaggtgatacagttttggacaagcaacagaaacctgcgacagctacggtt
gaaaaagatattgtaatcaatgaaacctctgatataaatctagatatctctttaaaaaca
aaatcagagtccgatgaaatatataactcaacaatgggtagtgtatttgaagatgcagtt
gaatatattatcaatgatgaagaagataatgttcaagaacagcctcaagatgtaattcaa
gaggaaaatgttccagatgatgagagtggttcgcaacaagaagtagagggaggtgatggt
gaagaagactatgatgaagaaaccaaagatcctgcagcacctgcagaacccgtagtacct
gtacctgtcgacgatgatactaatgatccacaatacatacctaggcgtggacggttctac
gagcatgatgaccgcatggcatatagtacaacaagctctgaaggatcagaatcagataat
ggatatgaagaagattcaggagatgacgatggagtttctgatcgtcgccgcgttagaaga
agacataccagtattaaaaaacaaaagtcagtaaccccagtagatactgctgaaaacact
gctttagcagttgtggatggatcactgtctactaaaaaagtcttggccatatctaaggtt
gctgctacaacaaaagactctgaaactgctgtaactgctgatggattggcaaaaaaactc
agtgtaggctctagaaaatctcgtgatttagatgctcttgataggtggacacatgatttg
tatgatgaaaacgagcagacacgcaaaagtcgtgatgagttactggcctcttatggatat
gacatacgtgaggaatctgaggcacctcgagctcgacgccaccataaatatgggcgagct
gccactaccaaatatactcgtagttggcaggatacaaaagcttacattggtgctgctgga
ggccaacagtctatgaaagttaagcgtggaggtatggctcgacgcaatgttggtggtcta
aataagaacataaacaaatctacaactgatgagtacacctctgaattccctgctttggat
gatacaaaaaaatcagtgcctaatacttcaactcttccttcaactgagtcttctgcagtt
gtagaagtctcagaccagaatcatgaacaacaactgaaatctctttctgttcaaaatgaa
gataaaaaatctgttgctgcagttgtggaaactagccaggctcggcatcacacctcgtca
tcgcgagcaactccaaaatataatacaacttcccctacaaatcgaaacaatcgccaggac
caaaatggcggaccttcatcgtcatcaactaataataaaaactattacaatcggtcttca
actgagtctccaattagcaaagaaaaaggtgctcaagtaaatcgagactctccttcctca
gcagctaactcaaacttctttaaccgaagaccacaacaaaacagtagtggccatactcaa
catcataattataaacagcaacactacaacagcagtcaacataaccagcaacaccaaaat
tcttcaccttcaggacctcgtagccgtaacttccatcaacaccagacttcgcaacaatat
aatcgtgatagatatttttctaagggagcaacaccttcatcttcatccagttcaaatcaa
cacaattacgatcagcagcatcattctggagtgcctactactgctggcacaggacgtaca
caacatggtggcggacattatcaacactacaataatcgccaatatgaaaacgaaaatcaa
ccaattgatccacctgtaccaccaacaccagttgtgcgtagctcaaaacggtactcagtt
caaagtcgcagggagcttcctgacccagtactaaattttggtggtttatctaagacacct
cagccacagcctccagctcctcagcaacaaaatgggttagttatgcaagatcaacaaatg
caacccacgcctcagcaactacaacagcaacaaccaatccaaattcatcaacaaccaccg
ccattgttaccacagtaccatcaacccttacaacaaatacatcacggcatggtacttgat
cacaacactggtatgatggttatggctgctgctgatccaaccatgtaccatcatcaaatg
tatgctacgccccagtatgctactggagttgcaccgggtccagcagctggaagtgctgat
gatcagaatgcagcagcagctgctgctgcagctgctcttcagatgcttgcagctcaggca
gctgtttaccaaccagtaccaacaggtgctacaggtgtaacatcaccaccatctggaaca
caatccttgcaacaaccagaaaccttcatgactacttactatcaaccacagcaacagcca
caacaacaacctcctccaagacgtgttaatttggctatacccatagtggcaccgcctcca
gaacctaatcaacagcaagggaatttgaaaactaacttatccactacaccacctcctact
acagcttcagccaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (41)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APHIDBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (1)   
   Pfam (1)   
All databases (54)   

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