KEGG   Acyrthosiphon pisum (pea aphid): 100164958
Entry
100164958         CDS       T01076                                 
Symbol
Usp
Name
(RefSeq) ultraspiracle
  KO
K08524  retinoid X receptor alpha
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:api00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    100164958 (Usp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:api03000]
    100164958 (Usp)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:api03310]
    100164958 (Usp)
Transcription factors [BR:api03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    100164958 (Usp)
Nuclear receptors [BR:api03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   100164958 (Usp)
SSDB
Motif
Pfam: Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 100164958
NCBI-ProteinID: NP_001155140
APHIDBASE: ACYPI005934
UniProt: A0A8R1TDF6 C5IJJ4
Position
X:78537390..78577098
AA seq 433 aa
MFKKEKPMMSVSAIIQSRAAHHHWGRGLRLDNNMSLGSMGPQSPLDLKPDTATLMVNFSP
PGAPLSPAGLYSVDRNNMMNNSCNVQDSPNYPPNHPLSGSKHLCSICGDRASGKHYGVYS
CEGCKGFFKRTVRKNLSYACREENKCIIDKRQRNRCQYCRYQKCLTMGMKREAVQEERQR
TKERDHNSIEVEPTSSSNTDMPVELILRAENKADAIKTEQQYIEQQHPQHTVGAICQATD
KQLIQLVEWAKHIPHFKNLPLGDQVLLLRAGWNELMIAAFSHRSISVKDGIVLATGLTVD
RDSAHQAGVEAIFDRVLTELVAKMRDMGMDRTELGCLRTIILFNPGSKGLQSVNEVEVLR
DKVYVALEEYCRTTHPEEPGRFAKLLLRLPSLRSIGLKCLEHLFFYKLIGDSPIDTFLME
VLESSSHDVQVAT
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgttcaagaaagaaaaacccatgatgtccgtgtcggccatcatacagagcagggcggcg
catcaccactggggcagaggattaagattggacaataatatgtcactgggttcaatgggt
cctcagtcacctctagacctcaaacccgacacggcaactctaatggtcaatttcagccct
ccgggagctcctctaagtcctgcaggattatacagtgtcgaccggaacaatatgatgaat
aattcttgcaacgtacaagactctccgaattacccgcccaaccatccgctcagcggttcg
aaacatctgtgctccatatgcggcgatcgcgccagcggaaaacattacggagtgtacagc
tgcgaggggtgcaaagggttcttcaaacgtaccgtgaggaagaatttgtcttatgcgtgt
cgcgaagaaaacaaatgcatcatcgacaagcgccaacgaaatcggtgccagtactgcagg
tatcaaaaatgtttgaccatgggcatgaaaagagaagccgtgcaggaggaaaggcaacgt
acaaaagaacgagatcataatagcatagaagttgaacccacgagcagttctaatactgat
atgccagtggaacttatattaagggctgagaataaagctgatgctataaagactgaacaa
cagtatatagagcaacaacatcctcaacatactgttggtgctatttgtcaagcaactgac
aagcagttaatacaacttgttgagtgggccaagcatataccgcattttaaaaatttacct
ctaggcgatcaagttttgttattgagagctggttggaatgagttgatgattgcagcattt
tcccatagatcaatcagtgtaaaggatggtatagtcttagctactggacttactgttgac
agagattcagctcaccaagctggtgttgaagctatatttgatcgtgtactcactgaactc
gttgctaaaatgagagatatgggtatggatagaacagagcttggctgtttacgtactatt
attctttttaatccaggttcaaaaggtttgcagtctgtgaatgaagtggaagtactacgt
gataaggtttatgttgcgttagaagaatattgtcgtacaacacatccagaagaacctggg
cgatttgctaaactacttcttcggcttccttcattacgttcaattggtttaaaatgtctg
gaacatttattcttttataaacttattggagattcaccaatcgatacatttttaatggaa
gttcttgaatcatcgtcacatgacgttcaagtagctacatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APHIDBASE (1)   
   OC (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (14)   
   RefSeq(nuc) (4)   
   GenBank (5)   
   EMBL (5)   
Protein domain (2)   
   Pfam (2)   
All databases (58)   

Download RDF
DBGET integrated database retrieval system