KEGG   Acyrthosiphon pisum (pea aphid): 100167222
Entry
100167222         CDS       T01076                                 
Name
(RefSeq) LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)-like
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03018  RNA degradation
api03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100167222
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100167222
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100167222
   03041 Spliceosome [BR:api03041]
    100167222
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100167222
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     100167222
Spliceosome [BR:api03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    100167222
SSDB
Motif
Pfam: LSM Gemin6 DUF150_C
Other DBs
NCBI-GeneID: 100167222
NCBI-ProteinID: NP_001155739
APHIDBASE: ACYPI008033
UniProt: C4WUP0
Position
A3:9350526..9351375
AA seq 107 aa
MSGKDATSAPEKKKKESILDLTRYLEKAIRVKFSGGREVSGILKGFDPLVNLVLDNTLEY
LRDPDEPMKLTEDTRTLGLVVCRGTSIVLICPVDGMEAIANPFVQQD
NT seq 324 nt   +upstreamnt  +downstreamnt
atgagtggaaaagatgcaacttcagctcccgagaaaaagaaaaaggagagtattttagat
ttaacaaggtacttagaaaaagccattagggttaaattttcaggaggtcgagaagtgtcg
ggtattttgaaaggattcgatccattagtaaatctcgtattggataatactcttgagtat
ttacgagatcctgatgaacctatgaaactaacggaagatacgagaacattaggtttagta
gtttgtcgaggcacatcaatcgtgctaatttgtcctgttgatggtatggaagcaatcgcc
aatccttttgtacaacaagactag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (40)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   APHIDBASE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (56)   

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