KEGG   Apibacter sp. B2966: G8C43_06520
Entry
G8C43_06520       CDS       T06471                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
apib  Apibacter sp. B2966
Pathway
apib00521  Streptomycin biosynthesis
apib00523  Polyketide sugar unit biosynthesis
apib00525  Acarbose and validamycin biosynthesis
apib00541  O-Antigen nucleotide sugar biosynthesis
apib01100  Metabolic pathways
apib01110  Biosynthesis of secondary metabolites
apib01250  Biosynthesis of nucleotide sugars
Module
apib_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:apib00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    G8C43_06520 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    G8C43_06520 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    G8C43_06520 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    G8C43_06520 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    G8C43_06520 (rfbB)
Enzymes [BR:apib01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     G8C43_06520 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 RmlD_sub_bind 3Beta_HSD NAD_binding_4 adh_short NAD_binding_10 KR NmrA adh_short_C2
Other DBs
NCBI-ProteinID: QII72434
Position
complement(1496827..1497879)
AA seq 350 aa
MKKLIITGGAGFIGSHVVRRFVNQYPEYKILNLDALTYAGNLENLKDIENKPNYQFLKAD
ITNEEQIKEIFSEFQPDGVIHLAAESHVDRSITTPLEFVKSNVIGTVILLDAAKKVWNNN
YEGKRFHHVSTDEVYGTLGETGFFTEETKYNPHSPYSASKASSDHFVRAYTDTYDLPVVI
TNCSNNYGPNHFPEKFIPLLIHNILNNNPLPVYGDGNYTRDWLYVIDHAVAIDLVFHKGK
NKENYNIGGFNEWKNIDLVHLLCKLMDKKLGRKEGESAKLITFVKDRPGHDLRYAIDATK
INKELGWKPSVNFEEGLTKTIDWYMDNQDWLSHVTSGSYRKYYDEQYDLT
NT seq 1053 nt   +upstreamnt  +downstreamnt
atgaaaaaattaataattacaggaggtgccggatttatcggatctcatgtagtcagaagg
tttgtaaatcagtatccggaatataaaattttaaatttagatgcattaacttatgccggt
aatttagaaaatttaaaagatattgaaaataagcctaattaccaatttttaaaagccgat
ataactaacgaagaacaaataaaagaaatattttctgaatttcaaccggatggagtaata
cacttagctgctgaatctcatgtagacagatccataaccacacctttagaatttgtaaaa
tctaatgttataggaacggttattcttttagatgctgcaaaaaaagtatggaataataat
tatgagggtaaaagatttcatcatgtatccaccgatgaagtgtatggtacattaggtgaa
accggtttttttactgaagaaacaaaatacaatcctcattccccttattcggcttcaaaa
gcctcatcagatcattttgtaagagcatatacagatacctatgatttaccggtggtaatt
accaattgttctaataactatggtcccaatcattttcctgaaaagtttatcccgttgtta
attcataatatcttaaataataaccctttacctgtatatggtgatggaaattatacccgt
gactggttgtatgtaattgaccatgccgtagctattgatctggtttttcataagggaaaa
aacaaagaaaattataatataggaggatttaatgaatggaaaaacattgatttagttcac
ttattatgcaaattgatggataagaaattaggaagaaaagaaggagaaagtgccaaatta
ataacttttgttaaagatcgtcccggacatgatttacgctatgcaattgatgctactaaa
ataaacaaagagctaggatggaaaccttccgtaaattttgaggaaggattaactaaaact
attgattggtatatggataatcaagattggttaagccacgtaaccagcggctcataccga
aaatattatgatgaacagtatgatttaacgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (11)   
   Pfam (11)   
All databases (29)   

Download RDF
DBGET integrated database retrieval system