KEGG   Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_0287
Entry
APJL_0287         CDS       T00644                                 
Symbol
uvrC
Name
(GenBank) excinuclease ABC, subunit C
  KO
K03703  excinuclease ABC subunit C
Organism
apj  Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    APJL_0287 (uvrC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apj03400]
    APJL_0287 (uvrC)
DNA repair and recombination proteins [BR:apj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     APJL_0287 (uvrC)
SSDB
Motif
Pfam: UvrC_RNaseH_dom GIY-YIG UVR HHH HHH_5 HHH_2 GIY_YIG_2
Other DBs
NCBI-ProteinID: ABY68882
UniProt: B0BT25
Position
307927..309759
AA seq 610 aa
MFDAKAFLADVPHLPGVYRMYDAKNTIIYVGKAKDLKKRLSSYFRSQLASKKTEALVANI
HHIETTITHSETEALLLEHNYIKENQPKYNVLLRDDKSYPYILLTKHQHPRITSFRGSKK
VAGEYFGPYPNAGAVRETLNLLQKLFPIRQCEDSYYKNRSRPCLQYQIGRCLAPCVESYY
SQAEYDNQVNLVRLFLQGKDGQVIEHLVQKMENAAQELDFEAAARFRDQIQSVRAVQEKQ
FVSNERLDDLDIISIAYQHGIACVHILFVRHGKVLGNRSYFPKVPNNTDLSELADTFVGQ
FYLQMNQHRTIPNQIIIDQPLSESAALADVLSEQAGHKVSIADKNIRGDKSRYLALAKTN
AEAALTLQLKQDTHIRQRYDSLKTLLNLAEIKRMECFDISHTMGNQTVASCVVFDENGPL
KSDYRRFNIEGITGGDDYAAMEQALLKRYSRHLEEEKIPDIIFIDGGKGQLNRALETFAS
LNVSWDKRKPLLIGVAKGVERKAGLETLLISKWDKEIHLPPDSPALHLIQHIRDESHNHA
ITGHRKKRQKAFTESGLESIAGVGAKRRQALLKYLGGMQGVKAATLEEIQSVPGISKQLA
EVIFDTLQHS
NT seq 1833 nt   +upstreamnt  +downstreamnt
atgtttgatgccaaagcctttcttgccgatgttcctcatcttcccggtgtttatcgtatg
tatgatgcgaaaaatactattatctatgtcggtaaagccaaagatctcaaaaagcgttta
tccagttattttcgtagccaactcgccagtaagaaaaccgaggcgttagtcgctaacatt
catcatatcgaaaccacgattacccattcggaaacggaagcgttactacttgaacataat
tacattaaagagaatcagccgaagtacaacgtgcttttgcgtgatgataaatcctatccg
tatattttactcacaaagcatcaacatccccgaattacttcgtttcgtggtagtaaaaaa
gttgccggtgaatattttggtccgtatccgaatgcaggtgcagtgcgtgaaacgctaaac
ttgctgcaaaaactgtttccgattcgccaatgtgaagacagctactataaaaatcgttct
cgcccttgtttgcaataccaaattgggcgttgtcttgccccttgtgtagaaagttattac
tcacaagcggaatatgataaccaagtaaatttagtccgcttatttttacaaggtaaagac
ggacaagtgattgagcatttggtacaaaaaatggaaaacgctgcgcaagagctggatttt
gaagcggcggctcgttttcgcgatcagatccaatcggtacgagcggtgcaagaaaaacaa
tttgtctctaacgaacgtttggatgatttggatattatttcgatcgcttatcaacacggt
attgcttgcgtacatattttatttgtgcgtcacggtaaggtattgggtaatcgttcctat
tttcctaaagtgccgaacaataccgatttaagcgagttggcggatacctttgtcggtcaa
ttttatctacagatgaaccaacatcgcacgataccaaatcaaattattatcgatcagccg
ttaagtgaatcggcggcattagctgatgtgctgtccgaacaagcggggcataaagtcagt
attgccgataaaaatattcgtggcgataaaagccgctatttggcattggcgaaaaccaat
gcggaagcggcacttactttacaacttaaacaagatacgcatattcgccagcgttatgat
tcgctgaaaacattacttaatttagcggaaatcaagcgaatggagtgtttcgatatttct
cacacaatgggtaatcaaacggtagcttcttgcgtagtgtttgatgaaaatggaccgtta
aaatcggattaccgccgttttaatattgaaggtattaccggcggtgatgattatgcggca
atggaacaagccttattaaagcgttatagccgtcatttagaagaagaaaaaattccggat
attatttttattgatggcgggaaagggcagcttaatcgagcgttggaaacttttgcttca
ttaaatgtcagttgggataaacgtaaaccgctgttaattggtgtggcaaaaggtgtggaa
agaaaagccggtttagaaactttgctgatcagtaagtgggataaggaaattcacttaccg
ccggacagtcccgcactacatttgattcaacatattcgtgacgaatcgcataatcacgca
ataaccggacaccgtaaaaagcgccaaaaagcctttacggaaagtggcttagaatcaatc
gccggtgttggagcaaaacgtcgccaagcgttactgaaatacctcggcggaatgcagggc
gtgaaagccgcaactttagaagaaattcaatccgtacccggtatttcaaagcaacttgcc
gaagtgatttttgatacgttacagcatagctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

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