KEGG   Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_0329
Entry
APJL_0329         CDS       T00644                                 
Symbol
hepA
Name
(GenBank) RNA polymerase associated protein
  KO
K03580  ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
apj  Actinobacillus pleuropneumoniae JL03 (serotype 3)
Brite
KEGG Orthology (KO) [BR:apj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apj03021]
    APJL_0329 (hepA)
Transcription machinery [BR:apj03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    RNA polymerase-associated proteins
     APJL_0329 (hepA)
SSDB
Motif
Pfam: RapA_C Tudor_RapA Tudor_1_RapA Helicase_C SNF2-rel_dom ResIII DEAD Flavi_DEAD AAA_22
Other DBs
NCBI-ProteinID: ABY68920
UniProt: B0BT63
Position
354175..357084
AA seq 969 aa
MFVVGQRWISESENNLGLGIVTASDNRTVTIQFPAAEEERIYALSVAPLTRVQFQKGDRI
NSVEGWQLDVEEVVENQGFIIYLGKRADSGEEAVLPEMQLDHKVSFSKPQDRLFSAQIDR
SDRFALRYRALQHQQAQFQSPLRGMRGIRASLIPHQLHIAKEVGQRVAPRVLLADEVGLG
KTIEAGMILQQQLFSGRVERVLVLVPESLQHQWLVEMLRRFNLKFSLFDEERCADFDKAD
EDGNDVSENPFDSEALVIASIDWLESSPNRAKQVLASNWDMLIVDEAHHLEWSENEPSVG
YQFVERLSKQTSAVLLLTATPEQLGQESHFARLALLDADRFYDYNSFVAEQKDYKPVADA
VATLLNDKPLSNDEQNSIADLLSEKDTEPMFKVINSEKSKENDRLQVRQELIRELIDRHG
TSRVLFRNTRQGVKGFPHRVYHQITLEMPSQYTNALKVMGMMGGVTKDDQLYPERLFQRM
NPAAKWADFDPRIEWLITFLKNHRDEKILVICKQADTAIALEQILREREAIRSAVFHEKM
SIVERDRASAYFAQMEEGAQVLISSSIGSEGRNFQFASNLVLFNLPDNPDLLEQSIGRLD
RIGQKNDIQIHVPCFENSMQMILATWYHQGLNAFEETCPMGAALFREFGEELEIFLKNPQ
AVGFDEFLAKTFKRQQHLKAELEQGRDRLLELNSNGGEAAQALAEAIAKEDNNPHLVNFA
LSLFDVIGLEQEDLGEQSIVISPTGHMLVPDFPGIAEDGTTVTFDRQLALMREDVEFLTW
DHPMIRNGIDLITSGYIGKSAISLLINKNLPAGTLLLEAIYMVETQAPKGLNLTRFLPPT
PVRILLDNKGNDMAAQVSFAGLEKQLKPLNKQMANKIAKMAQADIKKLIGISEQKIAAKL
PELIEKASQDADSTLSAELHRLTSLQAVNKNIRSDEIEALEQQRIESLKQIALANWRLDS
LRVIVSNKE
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgttcgtagtaggtcagcgctggattagcgaatcagaaaataatttaggcttaggtatt
gtaacggcaagtgataatcgtaccgttaccattcaatttcctgccgcagaagaagagcgt
atttatgcgctttcggtcgcccctttaacaagagtacaatttcaaaaaggcgatcgtatt
aatagcgtggaaggttggcagttagatgttgaagaggtagtcgaaaaccaaggttttatt
atctatttaggtaagcgagcggattccggtgaagaagccgtattgcccgaaatgcagtta
gaccataaagtgagtttcagcaagccgcaagaccgtttattttcagcacaaatcgaccgt
tccgatcgctttgctttacgttatcgagcattacaacatcaacaagcccaatttcaatcg
ccgctacgaggaatgcgaggcattcgtgcgagcttaattccgcaccaattacatattgct
aaagaagtcggtcagcgtgttgcgcctcgagtattattagcggatgaagtcggtttaggt
aaaaccattgaagcggggatgattttgcaacaacagcttttctccggcagagtcgagcgt
gtattggtgctggtgccggaaagtttgcaacatcaatggctagttgaaatgttacgtcgt
ttcaacttgaaattttcattatttgatgaagaacgttgtgccgatttcgataaagcggat
gaagacggtaatgatgtcagcgaaaatccatttgatagcgaagcgttagtgattgcctca
atcgactggttggaaagctcgccgaatcgtgctaaacaagtattggcaagtaattgggat
atgctcatcgttgatgaagctcatcatttggaatggtcggaaaacgagccgagtgtcggc
taccaatttgttgagcgtttatcaaaacaaacctcggcggtattacttctcaccgcaacg
cctgagcaactcggacaagaaagtcattttgcccgtttagcattattggatgcggatcga
ttctatgattacaacagctttgttgccgaacaaaaagattacaaaccggtggcggatgcg
gtggcgactttactaaatgacaagccgttaagtaatgatgagcaaaatagcattgcggat
ctgttgagtgagaaagacaccgagccgatgtttaaggtcatcaatagcgaaaaatcgaaa
gaaaatgaccgcttgcaagtacgtcaagaattgattcgtgagctgattgaccgccacggt
accagccgtgtgttattccgcaatacgcgtcaaggtgtgaaaggcttcccgcaccgtgtt
tatcatcaaattactttggaaatgccaagccaatataccaatgcgttaaaagtgatgggt
atgatgggcggtgtaaccaaagatgatcagctttatccggaacgtttattccaacgtatg
aatccggcggcaaaatgggcggattttgaccctcgtatcgaatggttgattacgttcttg
aaaaatcaccgtgacgagaaaatcttagtcatttgtaagcaagcggatacggcgattgcg
cttgaacaaatcttacgtgaacgtgaagcgattcgttcggcggtgttccatgaaaaaatg
tcgattgtagaacgagatagagcttccgcttactttgcccaaatggaagagggcgctcag
gtcttgattagttcgagtatcggctcggaagggcgtaacttccaatttgccagcaattta
gtgttgttcaatttaccggataatccggacttgttggaacaaagtatcggacgtttagac
cgtatcggtcagaaaaatgatattcagattcatgtaccgtgttttgaaaattcaatgcag
atgatattagcgacttggtatcatcagggcttaaatgcgtttgaagaaacctgtccgatg
ggcgctgcgttattccgtgaattcggcgaagagttggaaatcttcctgaagaatccgcaa
gcggtcggatttgacgaatttcttgcaaaaacctttaaacgccaacaacacttgaaagcg
gaattagagcaaggtcgagatcgtttacttgagctcaattcaaatggcggcgaggcggca
caagcgttggctgaagcgatcgcaaaagaagataataatccgcacttagtcaattttgct
ttgagtttatttgatgttatcggcttagagcaggaagatttaggcgagcaatctatcgtg
attagcccgaccggccatatgcttgtacctgacttcccgggtattgcggaagacggtacg
acagtcacctttgaccgtcagcttgcactcatgcgagaagacgttgagtttttaacttgg
gatcacccaatgattcgtaacggtattgacttgattacttccggatatatcggtaaatcg
gcaatttcgttactgattaataaaaacttaccggcaggcactttattgcttgaagcgatt
tatatggtggaaactcaagcgccgaaaggtttaaatttaacgcgtttcctaccgccgaca
ccggtgcgtatcttattagataataaaggtaacgatatggcggcccaggtgtcgtttgca
gggcttgagaagcagttaaaaccgctgaataaacaaatggcaaataaaattgcgaaaatg
gcgcaagcggatattaaaaaattaatcggtatcagcgagcaaaaaatcgcagctaaatta
ccggaattaatcgaaaaggccagccaagatgcggatagtacattaagtgcggaattgcat
cgtttaacctcgttacaagcggtgaataaaaatattcgttctgatgaaattgaagcattg
gaacaacaacgcattgaatcgcttaagcaaattgcattagcgaattggcgtttagacagc
ttacgtgtgattgtaagtaataaagaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

Download RDF
DBGET integrated database retrieval system