KEGG   Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_1294
Entry
APJL_1294         CDS       T00644                                 
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon chain
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
apj  Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03030  DNA replication
apj03430  Mismatch repair
apj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:apj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    APJL_1294 (dnaQ)
   03430 Mismatch repair
    APJL_1294 (dnaQ)
   03440 Homologous recombination
    APJL_1294 (dnaQ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apj03032]
    APJL_1294 (dnaQ)
   03400 DNA repair and recombination proteins [BR:apj03400]
    APJL_1294 (dnaQ)
Enzymes [BR:apj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     APJL_1294 (dnaQ)
DNA replication proteins [BR:apj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     APJL_1294 (dnaQ)
DNA repair and recombination proteins [BR:apj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     APJL_1294 (dnaQ)
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ABY69850
UniProt: B0BQL5
Position
complement(1422235..1423008)
AA seq 257 aa
MSEQPIVRQVVLDTETTGMSFSGPPQIGHNIIEIGAVEVINRRLTGRTFHVYIKPPREVE
EEAIKVHGITNEFLQDRPVFAEVADEFIEFIKGAELIIHNAPFDVAFMDQEFSYLENPPP
KTAEMCSVTDSLAVARKMYPGKRNNLDALCDRLGIDNSKRVLHGALLDAEILADVFLMMT
GGQLALLGEEDASANHENIADLGLGTITKFETSGLIVLSLSEEEQTAHEEYLKLIDKKSK
GNCIWMRSNEMESEQIH
NT seq 774 nt   +upstreamnt  +downstreamnt
atgagtgaacaaccgatagtaagacaggtggtgctggataccgaaacaaccggtatgagt
tttagcggaccaccgcaaattggacataatattattgaaatcggtgcggtcgaagtgatt
aatcgtcgcttaaccggccgtacttttcacgtctatattaaaccgccgcgagaagtggaa
gaagaggcgattaaagttcacggcattaccaatgagtttttgcaagataggcctgtgttt
gccgaagttgcggacgaatttattgaatttattaaaggtgcagagctaatcattcataat
gcccccttcgacgtggcatttatggatcaagagttttcttatttggaaaacccaccgccg
aagacggctgaaatgtgcagtgtgaccgatagtcttgcggtcgctcgaaaaatgtacccg
ggcaagcgtaataacttagatgcattgtgcgaccgtttaggcattgataacagcaagcgt
gtacttcacggggcgttactggatgcggagattctggctgatgtattcttgatgatgact
ggcggacagctggcgttattaggtgaagaggatgccagtgcgaatcatgaaaatattgca
gatctcggtttaggtacgataacgaagtttgaaacaagcggtttaattgtgttatctctg
agtgaagaagagcaaacggcacacgaagaatatctcaaactgattgataaaaaatctaag
gggaattgtatttggatgcgctcgaatgaaatggaatcggagcaaattcactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (16)   

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