KEGG   Acetobacter pasteurianus 386B: APA386B_2261
Entry
APA386B_2261      CDS       T02786                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
apk  Acetobacter pasteurianus 386B
Brite
KEGG Orthology (KO) [BR:apk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apk03032]
    APA386B_2261 (topA)
   03400 DNA repair and recombination proteins [BR:apk03400]
    APA386B_2261 (topA)
Enzymes [BR:apk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     APA386B_2261 (topA)
DNA replication proteins [BR:apk03032]
 Prokaryotic type
  DNA Topoisomerases
   APA386B_2261 (topA)
DNA repair and recombination proteins [BR:apk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      APA386B_2261 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom
Other DBs
NCBI-ProteinID: CCT60303
UniProt: S6D5R2
Position
complement(2323229..2325922)
AA seq 897 aa
MTDVVVVESPAKAKTINKYLGDGYTVLASFGHVRDLPPKDGSVLPDEDFAMKWQSDERGM
KQVAAIAKALKGAHRLYLATDPDREGEAISWHVRAMLEERKALKGVDVQRVTFNEITKSA
IRYAMEHPRDLDFPLIEAYLARRALDYLVGFTLSPVLWRKLPGSRSAGRVQSVALRLICE
REAEIEVFKPREYWSVIASLLTPAGAAFTARLTHLNGKKLDQFDLHNAELAEAAKKAVEA
ENLAVKSIERRKVRRNPQPPFTTSTLQQEASRKLGMSAQTTMRTAQQLYEGMDLGGETVG
LITYMRTDGVTMAQEAINAIRQHIGQKIGTEYVPAKPRIYTSKVKNAQEAHEAVRPTDVS
RTPESVARFLNNDQRRLYELVWKRAVASQMESASLDQVAVDIAGPSGQTVLRANGSIITF
EGFLKLYREGRDDTEKAADDDARMLPSMQEKDPLKREKVDAEQHFTQPPPRYSEASLVKK
MEELGIGRPSTYASILTVLQDRSYVRLENRRFIPEARGRLVTAFLVSFFERYVDTGFTAS
LEELLDDISGGRAQWKQVLAAFWNDFSKAVSGTKELTITDVLNALDKDLGPFFFPERADG
SDPRVCPSCGTGRLGLKLGRYGAFIGCSNYPECQYTRRLTSDSAEEGDDAALKDGMRLLG
QNPETGEDITVRQGPWGLYVQQGEPNPEDKKAKPKRASLPKNINGESITLDQALGLLSLP
RLVGIHPETGEPIQAGLGRFGPFVKMGAVYGSLDKDDDVLTIGLNRAVDALAKKLASIRN
LGVHPKDGEPVMVRKGRFGPYVQHGQMVATLPRGTDMDAVTLDEAVALLADKGKPLKAKA
GAKKKATTTKTAAKKKTATKSTAKADAEGAEKAAPKKKAPAKKKATTTTRKKKAETE
NT seq 2694 nt   +upstreamnt  +downstreamnt
atgactgacgttgttgtggtcgaatcgcccgcaaaggcaaaaacgatcaacaaatatctg
ggtgatggctacacggtgctggcctccttcgggcatgtgcgcgatctgccacccaaggat
ggctccgtgctgccggatgaagactttgccatgaagtggcagtctgatgaacggggcatg
aagcaggttgctgccattgccaaagcgcttaaaggtgcccaccgactgtacctggccact
gacccggaccgtgagggtgaagccatttcgtggcatgtgcgcgccatgctggaagaacgc
aaagccctgaaaggggtggatgttcagcgcgttacgtttaacgaaattaccaaatccgcc
atccgctacgccatggagcacccgcgggatctggatttcccgctgattgaggcctatctg
gcccgccgggcgctggattatctggtgggctttacgctttcccccgtgttgtggcgcaag
ctgccggggtctcgcagtgcggggcgtgtgcaatctgtggcgctgcgtctgatttgtgag
cgcgaagccgagattgaggtttttaaaccgcgggaatactggagcgtcattgcatcgctg
ctcacccccgcaggtgccgcctttaccgcacggctgactcatctgaacggcaaaaagctg
gatcagtttgatctgcacaatgcggaactggccgaggccgccaaaaaagcggtggaagct
gaaaaccttgccgtaaaatctatcgaacgccgcaaggttcgccgtaacccgcagcctccg
ttcaccacctccaccttgcagcaggaagcctcccgcaagttgggcatgagcgcgcaaacc
accatgcgcaccgcccagcagctttatgaagggatggatctgggcggtgaaaccgtaggt
ttgatcacctatatgcgtaccgatggcgtgacgatggcgcaggaagccatcaacgccatt
cgccagcatatcggccagaaaattggcacggaatacgtgcctgccaagccacgtatctat
acctccaaggtcaagaacgcgcaggaagcgcatgaggctgtgcgccccaccgatgtgtcc
cgcacgcccgaatccgttgcccggttcctgaataatgaccagcgccggttgtacgaactg
gtatggaagcgtgctgttgccagccagatggaatccgcatctctggatcaggtagcggta
gatattgcaggcccctccggccagaccgtactgcgtgccaatggctccatcatcacgttt
gagggctttctcaagctctaccgtgaagggcgcgatgatacggaaaaagcagcggatgat
gatgcccgtatgctgcccagcatgcaggaaaaagatccgctcaagcgcgaaaaggtggat
gccgaacagcacttcacccagccgccgccgcgttattccgaagcatcgctggtgaaaaaa
atggaagagctgggcattggccgcccctctacctacgcttccattctaaccgtgttgcag
gaccgcagctatgtgcggctagaaaaccgccgctttattcccgaagcacgtgggcggctg
gtcacggccttccttgtctcgttctttgagcggtatgtggatacgggctttactgccagc
cttgaagaactgctggatgatatttccggtggccgtgcgcagtggaaacaggttctagcc
gcgttctggaacgatttttccaaggccgtatccggcaccaaggaactcaccattaccgat
gtgctcaatgcactcgataaggacctggggccgttcttcttccccgaacgtgctgatgga
tcagaccctcgggtttgcccctcctgcggtacaggccgccttgggctgaagctgggccgt
tatggcgcatttattggctgttccaactacccggaatgccagtacacccgccgcttaacg
tctgacagcgcggaagaaggtgatgatgccgcccttaaagacggcatgcgccttttgggc
cagaacccggaaacgggtgaggatattaccgtgcgccaaggcccgtggggcctatatgtg
cagcagggtgaacccaacccggaagacaaaaaagccaagcccaaacgcgcctccctgccc
aaaaatatcaatggggaaagcattacgctggatcaggctcttggcctgctctccctgcca
cgccttgtgggtattcaccccgaaacgggtgagcccattcaggccgggcttgggcgcttt
gggccgtttgtaaaaatgggcgcggtgtatggttcgctggacaaggacgatgatgttctg
accatcggcctcaaccgtgctgtggatgcgttggctaaaaagctggcttccatccgcaat
ctgggtgtgcaccccaaggatggtgaaccggttatggtgcgcaagggccgttttggcccg
tatgtgcagcatgggcagatggtggccaccctgccgcgcggtacggatatggatgccgta
acgctggatgaggccgtggctttgctggcagataagggcaaacccctaaaagccaaggct
ggcgccaaaaagaaagccaccaccaccaaaacggcggccaaaaagaaaactgcaaccaaa
agcacagccaaggctgatgcagagggtgcggaaaaagcggctcccaagaaaaaggcgccc
gctaaaaagaaggccaccaccacaacacgcaagaaaaaagccgagaccgagtaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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