KEGG   Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_0394
Entry
APL_0394          CDS       T00476                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
apl  Actinobacillus pleuropneumoniae L20 (serotype 5b)
Brite
KEGG Orthology (KO) [BR:apl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apl03021]
    APL_0394 (rpoE)
Transcription machinery [BR:apl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     APL_0394 (rpoE)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_23 HTH_16
Other DBs
NCBI-ProteinID: ABN73498
UniProt: A3MZB2
Position
449086..449664
AA seq 192 aa
MSELVADQELVERAQKGDKKAFNLLVVRYQNRVAGLLTRYVSRDDIPDIVQESFIKAYRS
LESFRGESAFYTWLYRIAVNTAKNHLTALGRRPPKEDILAEDAESFDVGGQLRESDTPEN
VVLSEELKRVVFDTIENLPEELKTAITLSELEGLSYEEIAEVMQCPVGTVRSRIFRAREA
IDAKVNPLMQQI
NT seq 579 nt   +upstreamnt  +downstreamnt
atgagtgagctggtagccgatcaagaattggttgaacgtgcacagaaaggtgataaaaaa
gcatttaatttactcgtcgtacgttatcagaatagagtggcaggtttattaactcgctat
gtttcacgtgatgatattccggatattgtgcaggaatcttttattaaagcgtatcgttca
ttagagtctttccgtggagagagcgccttttatacgtggctttatcgtattgcggtgaac
actgctaaaaatcatttaaccgctttgggaagacgtcctcctaaagaagatattttggcg
gaagatgcggagagctttgatgttgggggtcaacttcgtgagagtgatacaccggaaaat
gtggtgctatccgaagaattaaaacgtgtcgtttttgacacgattgaaaatttacctgaa
gaactcaaaacggcaattactttgagtgagttggaaggtttaagttatgaagaaattgcg
gaagtcatgcaatgtcccgtcggtacggttcgttcgcgtatctttagagcaagagaagcg
attgatgcaaaggtcaatccgctaatgcaacagatttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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