KEGG   Actinobacillus pleuropneumoniae L20 (serotype 5b): APL_2006
Entry
APL_2006          CDS       T00476                                 
Symbol
holD
Name
(GenBank) DNA polymerase III psi subunit protein
  KO
K02344  DNA polymerase III subunit psi [EC:2.7.7.7]
Organism
apl  Actinobacillus pleuropneumoniae L20 (serotype 5b)
Pathway
apl03030  DNA replication
apl03430  Mismatch repair
apl03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:apl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    APL_2006 (holD)
   03430 Mismatch repair
    APL_2006 (holD)
   03440 Homologous recombination
    APL_2006 (holD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apl03032]
    APL_2006 (holD)
   03400 DNA repair and recombination proteins [BR:apl03400]
    APL_2006 (holD)
Enzymes [BR:apl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     APL_2006 (holD)
DNA replication proteins [BR:apl03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     APL_2006 (holD)
DNA repair and recombination proteins [BR:apl03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     APL_2006 (holD)
SSDB
Motif
Pfam: DNA_III_psi TelK_stirrup
Other DBs
NCBI-ProteinID: ABN75080
UniProt: A3N3U4
Position
2231501..2231893
AA seq 130 aa
MNIPQWVLTKPQVLKGDAQIRLDNAVKLVVVCEENHQASGLFLDILRTLQLQPNQYQWLD
AEQAQRLAFEHHPIFWLIQSELQAVEIAKKFANQTAWQHSSWKDLTNVTTKRQLWRQMAA
FYQHFEENHD
NT seq 393 nt   +upstreamnt  +downstreamnt
atgaatattcctcaatgggtgctgacaaaaccgcaagtattaaagggcgatgcgcaaatt
cgcttggataacgcggtgaaactggttgtggtatgtgaagagaatcatcaagctagcggt
ctgtttttggatattttacgcaccttgcagttacagccgaaccaatatcaatggttggat
gcggaacaagcccagcgtttagcttttgaacatcatcctattttttggctaatccaatca
gaattacaagcggttgaaattgcaaaaaaatttgcaaatcagaccgcttggcagcatagc
tcgtggaaagatttaactaatgtcacaactaaacgccaactttggcgacaaatggcggca
ttttatcagcattttgaggaaaatcatgattga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system