KEGG   Anas platyrhynchos (mallard): 101790280
Entry
101790280         CDS       T02816                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A isoform X1
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
apla  Anas platyrhynchos (mallard)
Pathway
apla03030  DNA replication
apla03410  Base excision repair
apla03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apla00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    101790280
   03410 Base excision repair
    101790280
   03420 Nucleotide excision repair
    101790280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apla03032]
    101790280
   03400 DNA repair and recombination proteins [BR:apla03400]
    101790280
Enzymes [BR:apla01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     101790280
DNA replication proteins [BR:apla03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    101790280
DNA repair and recombination proteins [BR:apla03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      101790280
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 101790280
NCBI-ProteinID: XP_038043571
Ensembl: ENSAPLG00000009950
EnsemblRapid: ENSAPLG00030020897
Position
16:complement(4375757..4402938)
AA seq 2285 aa
MRRRGGAGRAEPGGGGDPDPEGARDDGPALSALKRLERSQRTDRLDALFGFERPSEPGER
TGWLINMHPTEVLDEDRRPVSAVDYYFVQEDGSRFKVALPYRPYFYIATQQGCEREVSSF
LSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVDDLVKVRKEISPAVRKNRE
RDQANDVYTSMLSSALAGGSLTTEEEGASKKIANQMDNIVDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSTLPPEITRRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYM
IDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHVQETKPTII
VTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDGHVLDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLRHAIEEEEGLPLDQVTNFQEV
CDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAIVDEATCAACDFNKP
GANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLYPDGAPRAFHELSREEQAKYE
KKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
AAAVEMGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNAKKPKVTISYPGAMLNI
LVKEGFTNDQYQELEDPASLTYVTRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYS
KAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRFI
ISKKPEGSPVTERAIPLAIFQAEPTVRKHYLRKWLKSPSLQDFNIRAILDWDYYIERLGS
TIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFTSEGKRQVLANQ
PQEGTPSSQISDMEDFGVAKSLQPSVPIANKRKRVPLAEESQQMSQSLELSQSWREILGP
PPPMGTSREQHLVWLRYHKKKWELQARQRQERRKRRRLEDGSVAAGGGVVRDVLSKGLSS
YLRRTARSILDLPWQIVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVNQRIAKPEE
GAVYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRA
LIHLGCVCMVSRQLVRHLTGREAETFDIEHLEMRSLAQFTYLEPGSIRHIYLYHSSQGTK
ALFGLFIPSQRKAAVFVLDTVRSNQMPNLTNMFSAERSALLEKVGEDLLPPDKHIFEVRA
ETDPKTIYRAIQRLLLGYKDERRGPTLIAVQSNWDLKRLASGIPIIEEFPLVPVRVTDDI
SYSVLDWQRHAARRMIRHYLNLDTCLTQAFEMSRYYHIPIGNLPDDISTFGSDLFFSRHL
RRHNHLLWLSPTARPDLGGKEADDNRLVMEFDERALVEINNPGCYSTVCLELDIQSLAVN
TVLQSHHVNDMEGGSSMSVSFDVIQQASLEDMVTGNQAANIPASYDETALCSNTFRILKS
MVVSWVKEITQYHNIYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLFLQLVAEFK
RLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSRCWEFLLWM
DPANYGGIKGKVHSRIHYGEKDTSKRQVLEEEDSEEEEEVGEEEEEGESNVEELLENSWN
IVQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELQRNAPGSTPVKRRGTSQVSQEAPCET
GAMPGMITFSQDYVANELTQSFFTITQKIKKKMAGSRNATEPSDLFPVLPGSYLPLNNPA
LEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSDEAQFRDPCRSYVLPEVICRNC
NFCRDLDLCKDPALSQDGSVLPSWVCSNCEAQYDSDSIEMALVEALQKKLMAFMLQDLVC
NKCRGVKDTHMPVYCSCAGEFALTISSQVFMEHITIFQNIARHYSMAYLLETIEWLLRTN
PQLQQ
NT seq 6858 nt   +upstreamnt  +downstreamnt
atgcggcggcggggcggtgcggggcgagcggagccgggcggcggcggcgaccccgatccc
gaaggggcgagggacgatggccccgcgctgtccgccctcaagcgcctggagcggtcgcag
cgcacggaccggctggatgctctgttcggcttcgagcggccctcggagcccggcgagagg
acgggctggctcatcaatatgcatccgacggaggtgctggatgaggaccggcggccggtg
agcgctgtggattactactttgtgcaggaggatgggagccgcttcaaggtggctttgccc
tacagaccttacttctacatcgccacccagcagggctgtgagcgagaagtgtcctccttc
ctttctaagaagttccaagggaaaattgcaaagctggaaactgtccccaaagaagacttg
gatctgccaaatcacttggtgggtctgaagcggaactacatcaagctgtccttcaacaca
gtggatgacttggtgaaggtgcgaaaagagatttctcctgctgtaaggaaaaacagagag
cgagaccaggcgaacgatgtctatacgtccatgctgtccagtgctctggctggaggcagc
ctgaccacagaggaggaaggagcctcaaaaaagattgccaaccaaatggacaacattgtg
gatatgcgggagtacgacgtgccctaccatgtccgcctctccattgacctgaagatccac
gtggctcactggtacaacgtgcgataccggggcagcaccctccctccagaaatcacccgc
cgagatgacctcgtggagcgaccagatcctgttgttcttgcctttgacattgaaactacc
aaactccccttgaagtttcctgatgcagagacagaccagatcatgatgatctcctacatg
attgacgggcagggctacctgatcacaaacagggagattgtctctgaggatattgaagac
tttgagtttactcccaagccggagtatgagggaccattttgtgtctttaacgaaccagat
gaagctcatttaatccagaggtggtttgaacatgtccaggagaccaaacctactatcatt
gtcacatacaatggagacttctttgactggccctttgtggaagcaagagcagcagctcat
ggaatcaatatgtatcaggaaattggatttcagaaggacagccagggagagtacaaagca
tcacagtgcatccacatggactgtctaaggtgggtgaagagagacagttacctcccagtg
ggaagtcacaacctgaaagcagcagctaaggcaaagctgggctatgatccagtggagttg
gaccctgaagagatgtgccggatggctacagaggagcctcagaccctggccacttattca
gtgtccgacgcagttgctacctattacatgtacatgaagtatgtgcatcctttcattttt
gcgttgtgcaccatcattcccatggagcctgatgaggtgttgcggaaaggctctgggacg
ctgtgtgaggcactgctgatggttcaagcctatcacgccaacatcatcttccccaataag
caggagcaggaatttaacaaactcacagaggacgggcacgtgctggactcggagacgtat
gtaggaggccacgtggaagccctggaatcgggagtttttcgcagtgacatcccctgccgc
ttcaagatgaatcccgctgcctttgacttcttggtgcagcacgtggagaagacactccgg
catgctattgaggaggaggagggtttgccattggatcaagtcaccaacttccaggaggtt
tgtgatgaaatcaaagtcaaactgaattccctgaaggatgtccctaacagaattgagtgt
ccccttatctaccatttagacgtgggggccatgtaccccaacatcattctgaccaacaga
ttgcagccctcagcaatagtagacgaggccacttgtgctgcctgtgacttcaacaagccg
ggcgccaactgtcagcgccggatgacgtggcagtggagaggagaattcatgcctgcaagc
cgcagcgagtaccaccgcatccagcaacagctggaatctgagaagttccctcccctgtac
cccgatggagcaccccgggccttccacgagctctcccgtgaagaacaggccaagtatgag
aagaagagactggcagattattgccggaaggcctataagaagatccacgtcaccaaggtg
gaggagcgggtcaccaccatctgccagcgagagaattctttctatgtggacaccgtgcga
gccttcagggaccgtcgctacgagttcaaggggctgcacaaggtgtggaagaagaagctg
gctgcagctgtggagatgggagatgcctctgaagtgaaacgctgcaagaacatggagatc
ctctacgattcactgcagctggcacacaagtgcatcctcaattctttctacggctatgtc
atgcggaaaggagctcgctggtactcaatggaaatggctgggattgtctgcttcactgga
gcaaatatcatcacgcaggccagggaactgattgagcagattgggagacctctggaactg
gatacagatgggatctggtgtgtccttcctaacagcttcccagaaaactttgtcatcaag
tcaaccaatgccaagaagccaaaggtgacaatctcctacccaggtgctatgctgaacatc
ttggtgaaggaaggcttcacaaacgatcagtaccaggaactggaggacccagcctctctc
acctatgtcacacgctcagagaacagcatctttttcgaagtggatggaccatacctggcc
atgatcctcccagcttccaaagaggagggaaagaagctgaagaaaaggtacgcggtgttc
aacgaggacgggtccctggctgagctgaagggattcgaggtgaagcgacgaggtgagctg
cagcttgtgaagatctttcagtcctctgtatttgaggccttcctgaaaggcaccaccctg
gaggaggtctacgcttctgtggccaaggtggctgactactggctggacgtgctgtacagc
aaggctgccaacatgcctgattcagagctgtttgagctgatctcggagaaccgttccatg
tcccgcaagctggaggactacggggagcagaaatccacctccatcagcactgccaagcgc
ctggcagaattcctgggagaccagatggtgaaggatgcagggctgagctgccggttcatc
atttccaagaaaccagaagggtctccagtcactgagagggccatcccccttgccatcttc
caagcagagcccaccgtacggaagcattacctccggaaatggctgaagagcccctcgcta
caggacttcaacatccgtgcaatcctggactgggactactacattgagagactgggcagc
accatccagaaaatcattactattcctgcagctctgcagcaggtaaagaacccggttcca
cgggtccggcaccctgactggctgcataagaaactcctggagaagaacgatgtgtacaaa
caaaaaaaaatcaatgaactgttcacttctgaaggcaagagacaggtccttgccaaccag
ccccaagagggaacgcccagctcacagatcagcgacatggaggattttggggttgccaag
agccttcagccatcagtccccatcgcaaataaacggaagcgagtccctctggcagaggaa
agccaacagatgtcccagagcctggagctatcccagtcctggcgagagatcctgggccca
cctcctcccatgggaaccagcagggagcagcacctggtgtggctgcgctaccacaagaag
aagtgggagctgcaggcccgacagcggcaggagcggcggaagcggcggcggctggaggac
ggcagtgtggccgcaggaggaggagtcgtccgcgatgtgctctccaaagggctgagcagc
tacctgcgtaggacagcacggagcatcctggacttaccctggcagattgtgcagatcgct
gagaccagccagccaggcctgttcaggctgtgggcagtgatcgggagtgacctgcactgc
atcaagctgagcatccccagggtgttctacgtcaaccagcgcattgcaaaaccagaggag
ggagcagtctacaggaaggtaaacaggatcctaccccgctcaaatttggtttacaacctc
tacgagtactctgtccctgaagacatgtaccaagagcatatcaacgaaatcaatgctgac
ctctctgctccagacatcgagggagtatatgagactcaggtgccactgctcttccgagcc
ctcatccacctgggctgcgtgtgcatggtcagcaggcagctggtcaggcacctgacgggg
cgagaggctgagacctttgacattgagcacctggaaatgcgctcgctggcccaattcacc
tacctggagccaggaagtattcgccacatctacctctaccacagctcccagggcaccaag
gctctctttggccttttcatcccctcgcagcgcaaagccgccgtgtttgtgctggacacg
gttcgcagcaaccagatgccaaacctcaccaacatgttctctgcggagcgcagcgcgctg
ctggaaaaggtgggtgaggatctgctgcctccggacaagcacatctttgaagtgcgtgct
gagaccgaccccaagaccatctacagagccatccagcggctgctgctgggctacaaggat
gagcgccggggccccacactgattgctgtgcagtctaactgggacctgaaacggctggca
agtgggattcccatcatcgaggagttcccgttggtccccgtccgagtgacggacgacatc
agctactcggtcctggactggcagcgccacgcagcccgccgcatgatccgccactacctc
aacctggatacgtgcctgacccaggcttttgaaatgagcaggtattaccacattccaatt
gggaatctccctgacgacatctccacctttggctctgacctgtttttctcgcgccacctc
cgccgtcacaaccatttgctgtggctctcgcccacagctcgcccagacctggggggcaag
gaggctgatgacaaccgcctggtcatggagtttgatgagagagccttggtggaaatcaac
aaccctggctgctactccacagtatgtctggagctggacatccagagcctggctgtaaac
acagtgttgcaatctcatcacgtaaatgacatggaaggaggttccagcatgagcgtcagc
tttgatgtgattcagcaggcatccctggaagacatggtgacagggaaccaagctgccaac
atcccagccagctatgatgaaactgccctctgctccaacacattcaggattttgaagagc
atggtggtgagctgggtgaaggagattacgcagtatcacaacatctatgcggacaaccag
gtcattcatttttaccgctggcttcgctctccttcttcactgctctacgaccccgcgttg
caccggactctgcacaacatgatgaagaagcttttcctccagttagtggctgagttcaag
cggcttggctcttccgtggtgtacgccaacttcaaccgcatcatcctatgcaccaagaag
cggcgtattgaggatgcaatcagctacatggagtacatcatcaatagcatccactcaaag
gagatcttccactcccttactatttctttctcccgctgctgggagttcctgctctggatg
gatccagcaaattatggaggcatcaagggaaaagtgcattctcgcatccactacggggag
aaggataccagcaagaggcaagtgctggaggaggaagacagcgaggaagaggaggaggtg
ggggaagaagaggaggaaggggaatccaacgtggaggagctgctggagaacagctggaat
atcgtgcagttcctgccccaggctgcctcctgccagagctacttcctaatgattgtgtca
gcctacatcgtggctgtgtaccacagcatgaaggaggagctgcagcgcaacgcccctggg
agcactcccgtcaagaggagaggcaccagccaagtgtcccaagaggcaccgtgtgagaca
ggggccatgcctggcatgatcacgttctcacaggattacgtggccaatgagctcacccag
agcttcttcaccatcacccagaagatcaagaagaagatggccggttctcgtaacgccacc
gagccttcggacttgttcccagtgctgcctggctcctacttgccgctcaacaacccggct
ctagagttcatcaaatatgtttgcaaggtgctgtctctggatgccaacattaccaaccag
gtgaacaaactgcgcagggacctgctgcgcctcatcgaggtgggcgagttctcggatgaa
gcccagtttcgggacccttgccgctcctacgtgctccctgaagtcatctgcaggaactgc
aacttctgcagggacctagacctgtgcaaggaccccgctctctcccaggatggatcagtg
ctgcccagctgggtctgctccaactgtgaggcgcagtatgactccgactctattgaaatg
gcgttggtggaagccctgcagaagaagctgatggccttcatgctgcaggacctggtgtgc
aacaagtgtcgtggtgtgaaggacacacacatgcctgtgtactgcagctgtgctggagag
tttgccctcaccatctcctcccaggtcttcatggagcacatcaccatcttccagaacatc
gctcggcactacagcatggcctatctcctggaaaccatcgagtggctgctgcgtacaaac
ccccagctccagcagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (6)   
   Pfam (6)   
All databases (35)   

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