KEGG   Anas platyrhynchos (mallard): 101801287
Entry
101801287         CDS       T02816                                 
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
apla  Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:apla00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apla03021]
    101801287 (CHD1)
   03036 Chromosome and associated proteins [BR:apla03036]
    101801287 (CHD1)
Transcription machinery [BR:apla03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     101801287 (CHD1)
Chromosome and associated proteins [BR:apla03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     101801287 (CHD1)
    SLIK complex
     101801287 (CHD1)
SSDB
Motif
Pfam: SNF2-rel_dom CDH1_2_SANT_HL1 CHD1-like_C Helicase_C Chromo DEAD
Other DBs
NCBI-GeneID: 101801287
NCBI-ProteinID: XP_038026839
EnsemblRapid: ENSAPLG00030022518
Position
Z:complement(56457469..56509909)
AA seq 1808 aa
MNGHSDEESVRNSSGESSRSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSDSGSESGS
QSESESDTSREKKQVQAKPPKVDGTEFWKSSPSILAVQRSAVLKKQQQQQKAVSSDSVSE
EESSSSEDSADDSSSETKKKKHKDEDWQMSGSGSVSGTGSDSESEEDGDKSSCEESESDY
EPKNKVKSRKPPSRIKPKSGKKTAGQKKRQLDSSEDDDEEEEDYDKRGSRRQATVNISYK
EAEETKTDSDDLLEVCGEDVPQTEEDEFETIEKFMDSRVGRKGATGAATTIYAVEADGDP
NAGFEKSKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVKGMKKLDNYKKKDQETKRWL
KNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECSW
EDGALIAKKFQTRIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGQESLELRD
YQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTLT
SWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKSFL
GGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMPE
KFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQK
QYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDDNEFYNKQEALQHL
IRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELR
KQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ
KKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSTPSSSTPFNKE
ELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETRENEPGPLTVGDELLSQFKVAN
FSNMDEDDIELEPERNSRNWEEIIPEVQRRRIEEEERQKELEEIYMLPRMRNCAKQISFN
GSEGRRSRSRRYSGSDSDSITERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFGG
PLERLDAVARDAELVDKSETDLRRLGELVHNGCIKALKDNSCGQERAGGRLGKVKGPTFR
ISGVQVNAKLVISHEEELAPLHKSIPSDPEERKRYVIPCHTKAAHFDIDWGKEDDSNLLV
GIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQLQTRADYLIKLLNKDLARKEAQ
RLAGAGNSKRRKTRTKKNKIKASKIKEEVKSDSSPQPSEKSDEDDDDEDNKDEIVSVKHL
HKKIKAEKENEEKPEPDIGIKKEAEEKRETKEKENKRDLKREKKEKEDKKELKEKDIKEK
RENKVKESTQKEKEVKEEKVNEIKSENKEKNKKIPLLDTPVHITATSEPVPISEESEELD
QKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYTNPEQ
IKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQHNDQNISSNVNTHVIRNPDVE
RLKETTNHDDSSRDSYSSERHLSQYHDHHKDRHQGDAYKKSDSRKRPYSAFSNGKDHRDW
DHYKQDSRYYSDSKHRKLDDHRSRDHRSNLEGNLKDSRPHSDHRSHSDHRIHSDHRSASE
YSHHKSSRDYRYHSDWQMDHRASGSGPRSPLDQRSPYGSRSPLGHRSPFEHSSDHKSTPE
HTWSSRKT
NT seq 5427 nt   +upstreamnt  +downstreamnt
atgaatgggcacagtgatgaagaaagtgtaagaaacagcagtggagagtcaagtcgatca
gatgatgattctgggtcagcatcaggttctggatctggttcaagctctggaagcagtagc
gatggaagtagcagccagtcagggagcagtgactctgactctggttcagagtcaggcagt
caatcagaatcagagtccgacacatctagagagaagaaacaagtacaagctaaaccacca
aaagttgatggaactgagttttggaagtccagtccaagtatacttgctgtacagagatca
gcagtgctcaagaagcaacagcaacaacaaaaggcagtatcatcagacagtgtttctgaa
gaggagtcatccagtagtgaagattctgctgatgactcatccagtgaaaccaagaagaaa
aaacataaagacgaagactggcaaatgtcagggtcaggatcagtatcaggaactggttct
gattctgaatcagaggaagatggggataaaagtagttgtgaagaaagtgaatctgactat
gagccaaaaaacaaagtcaaaagccggaaacctccaagcagaattaagccaaaaagtggg
aaaaagactgcaggacagaaaaagaggcaacttgattcatctgaggatgatgatgaggag
gaggaggattatgataagagaggatctcgtcgccaggcaacagtcaacattagttacaaa
gaagctgaagaaaccaagacagattctgatgatttgctggaagtttgtggagaagatgtc
ccacaaactgaagaagatgaatttgaaactatagaaaagtttatggatagtcgggttggc
cgaaaaggagccactggtgccgcaaccactatctacgcagttgaggcagatggtgaccca
aatgctgggtttgaaaagtcaaaggagccaggagaaatacagtatcttattaaatggaaa
ggctggtcacacatccataacacttgggaaactgaggaaacactgaagcaacaaaatgtt
aaaggaatgaagaaactggacaactacaagaaaaaagatcaggaaacaaaacgatggctg
aaaaatgcttctccagaagacgtggaatattataactgccaacaggagcttacagatgat
ctacataagcagtatcagatagtggaaagaataattgctcattcaaatcaaaagtcagca
gctggttatccagactactattgcaaatggcaaggtctaccttattcagaatgtagctgg
gaagatggtgctctcattgccaaaaagtttcagacacgcattgatgagtattttagcaga
aatcaatccaaaaccactccttttaaggactgcaaggttctaaaacagagaccaagattt
gttgcactaaagaagcaaccatcttacattggaggacaggaaagtttggagttaagagat
tatcagttaaatggattgaattggcttgctcattcgtggtgcaaagggaatagttgtatt
cttgcagatgaaatgggtctgggtaaaacaatacaaacaatttcttttctgaactacctg
tttcatgaacatcaactgtatgggcctttcctgctggttgtgccactttctactttgaca
tcttggcaaagagagattcaaacttgggctcctcagatgaatgctgtagtttacttagga
gatataaccagcagaaatatgataagaactcatgaatggatgcatccacagaccaaacgg
ctgaagtttaacatacttctgacaacatacgaaattttgctgaaggataagtctttcctt
ggcggtctgaattgggcattcataggggttgacgaagctcatcgtttaaaaaacgacgac
tctcttctgtacaagactttaatagattttaagtctaaccatcgacttcttattactgga
actcctctgcaaaactccctcaaagaactttggtctttgttgcacttcatcatgccagaa
aaattttcctcctgggaagattttgaagaggagcatggcaaaggaagagagtatggttat
gcaagtcttcacaaagagcttgaaccgtttttgctgagaagagttaaaaaagatgtagaa
aagtctttacctgcaaaagttgagcaaattctgaggatggaaatgagtgcattgcagaaa
caatattacaagtggattttaacaaggaattataaagccctcagtaaaggttcaaaaggc
agtacctctggctttctgaacattatgatggaactcaaaaagtgttgtaaccattgctac
ctcattaaaccaccagatgataatgaattctataataaacaggaggccttacagcatttg
atacgtagcagcgggaaactaatccttcttgacaagctactgattcgtctgagagaacgt
ggcaacagagttctgattttctctcagatggtgaggatgctggacatcctagcagagtac
ctaaagtatcgtcagtttcccttccagagacttgatggatcaataaaaggggaattgagg
aaacaagcactggatcattttaacgcagaaggatcagaggacttttgctttttactgtct
accagagctggaggattaggtataaacttggcatctgctgacactgtagttatatttgat
tctgactggaatccacagaatgatctgcaagcacaagctagagctcataggattgggcag
aagaaacaggttaatatttatcgtctagtcacaaaaggatcagtagaagaagatattctt
gaaagagccaagaagaagatggtgctagatcacctagtaattcagagaatggacactaca
ggaaaaactgttctacatacaggttctactccttcaagctcaacaccttttaataaagaa
gaattatcagcaattttaaagtttggtgcagaggaactttttaaagaacctgaaggggaa
gaacaggaaccccaggaaatggatatagatgaaatcttgaagagagctgaaactcgggaa
aatgagccaggtccattaactgtaggagatgagttgctttcacagttcaaggtggccaac
ttttccaatatggatgaagacgatattgagttggaaccagaaagaaactcaagaaactgg
gaagaaataatcccagaagtccagaggcgaagaatagaagaggaggaaagacaaaaagaa
cttgaagaaatatatatgctcccaaggatgagaaactgtgcaaaacagatcagctttaat
ggaagtgaaggaagacgcagtaggagcagaagatattctggatctgatagtgactccatc
acggaaagaaaacgtccaaaaaagcgtggaagaccacgaactattcctcgagaaaatatt
aaaggatttagtgatgcagagatcaggcggtttatcaagagttacaagaaatttggtggt
cctcttgaaaggttagatgctgtagctagggatgctgagctggtcgataaatctgaaaca
gaccttagacgtttgggagagcttgtgcataatggatgcattaaagctttaaaggacaat
tcatgtggacaagaaagagcaggaggtagacttgggaaagttaaaggcccaacatttaga
atctcaggagtgcaggtgaatgcaaagctagtcatctctcatgaagaagagttggcacca
ttgcacaaatccattccttcggatccagaagaaaggaaaagatatgtaatcccatgccac
accaaggctgctcattttgatatagactggggtaaagaagatgattccaatctgttagta
ggcatctatgaatatggttatggcagctgggaaatgataaaaatggatcctgatctcagt
ttgacacagaagattttacctgatgatccagataagaaaccccaggcaaagcagttacag
acccgtgcagactacctcataaaattactgaataaagaccttgcaagaaaggaagcacaa
agacttgctggtgcaggcaattcaaagaggaggaaaacaagaactaagaagaataagata
aaggcttcaaaaataaaagaagaagtaaaaagtgattcatcaccacagccctcagaaaaa
tctgatgaagatgatgatgatgaggataacaaggatgagattgtttcagtgaaacatcta
cataaaaaaataaaagcagaaaaagaaaatgaagaaaagcctgagccagatattggtata
aagaaggaagctgaagaaaaaagagagacaaaagaaaaggaaaataagagggatttgaaa
agggagaaaaaagaaaaagaggataagaaagaattaaaagaaaaagatattaaagaaaag
agagaaaacaaagtaaaagaatccacacagaaagaaaaagaagtaaaggaagagaaggta
aatgaaatcaaatcagaaaataaagaaaaaaataaaaaaattccattgttggatactcca
gttcacattactgcaaccagtgaaccagttcctatatcagaagaatctgaagaactagat
cagaagacgttcagtgtgtgcaaagaaagaatgaggcctgtcaaagcagcattgaaacag
ctggatagaccagagaagggtctttctgaacgggagcagctggaacatactagacagtgt
ctaatcaaaattggggatcacattactgaatgcctaaaggagtacacaaatccagaacaa
attaaacagtggaggaaaaatttgtggatttttgtctctaagtttacagaatttgatgcc
agaaaattgcacaaactgtataagcatgcaatcaaaaagcgccaagagtctcagcaacac
aacgaccagaatattagcagcaatgtgaatacacatgtaatcagaaatccagatgtagaa
agactgaaagagactacaaatcatgatgacagtagcagagacagttactcttctgaaaga
catctgtcacagtaccatgatcatcacaaagacaggcatcagggagatgcttacaagaaa
agtgactctaggaaaaggccatattcagccttcagcaatgggaaagatcacagagactgg
gatcactacaaacaagacagcagatactacagtgatagtaaacataggaagttagatgac
cacaggagcagagaccacaggtcaaacctggaaggaaatctaaaagacagccggcctcat
tcggatcaccgttcccattcagaccacaggatacattcagatcaccgttctgcttcagag
tacagccatcataaatcttccagagattataggtaccactcagactggcaaatggaccac
agagcttctggtagtggcccaaggtcaccactagatcagaggtctccttatggttcaaga
tctcccctgggacacaggtctccatttgaacactcatcagatcacaaaagtacacctgaa
catacatggagtagccggaagacataa

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