KEGG   Anas platyrhynchos (mallard): 101801988
Entry
101801988         CDS       T02816                                 
Symbol
USP40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X5
  KO
K11869  ubiquitin carboxyl-terminal hydrolase 40 [EC:3.4.19.12]
Organism
apla  Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:apla00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:apla01002]
    101801988 (USP40)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:apla04121]
    101801988 (USP40)
Enzymes [BR:apla01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     101801988 (USP40)
Peptidases and inhibitors [BR:apla01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   101801988 (USP40)
Ubiquitin system [BR:apla04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    101801988 (USP40)
SSDB
Motif
Pfam: UCH UCH_1
Other DBs
NCBI-GeneID: 101801988
NCBI-ProteinID: XP_021130122
Ensembl: ENSAPLG00000014274
EnsemblRapid: ENSAPLG00030015257
Position
7:complement(29268713..29302397)
AA seq 1029 aa
MFGDLFEEDFSFISNNHCGKGKKSKPRDSEPPAPRDFTNLSGIKNQGGTCYLNSLLQTLL
FTPEFREALFSLGPEELGTLDDINKPDAKVRIIPLQLQRLFAQLLLLDQQAASTTDLTES
FGWNSNEEMRQHDVQELNRILFSALETSLVGTSGHDLINRLYHGTVVNQIVCKECKNISE
RQEDFLDLTVAVKGVAGLEEALWNMYVEEEYFENENLYRCGACDKLVEASKSAKLRKLPP
FLTISLLRFNFDFEKCERYKETSCYTFPIQINLRPFCEQTEMDDSEYMYELFSVIIHKGG
CYGGHYHVYIKDVDELGNWQLQEDEDRLIEDKALRENENAKEAENPLAVLKGILSEEESK
QIPVDQLGQKLLEKKKVSWNKKYRKQYGALRKYLQNHPQIFQFSPDKNKVGLKEKYKLPF
KSDSQGLDLQSPSQKNDIQWNLEKTPTRLEETSVGCHWFDLNDSKVQPIKEEDIEQQFQG
KESAYMLFYRKSRLKRPPEARGNPRYQIPEHLLNEMNAANTELQKKRAECDSANNGIDLH
LHLSSCYKFYNGALHPSLTWKESVLDLTIDRRKTLGDLRQSIFQILESWEGDMILSNAKP
LPAGLHLYEILDGDELTLDCFGLADGADIFVWNGKEVGGIKVMTGPDHEPVIINVLRLAE
YNEGGKGQHFTESQHIFPCSTKLEDLHRALAPSGGIILKNGSGPDREGKNWEVLLEEQMK
ETIRSVGLTDGCSVLILDSHDQSFVNVSSGNLTAFTYDISWLQVKNFCGTEDEEKHVKIT
ATIETVMSDIKMKAIQELQLDEELASDSCLRPVSGNGKLLSPVPEDYTVKEAELKMGSLL
GLCRGKAPTSTQLFLYFIIGHDQHMGPEMEIVVEETASVKECLNLMLEKSGLSGDSWHLR
RIDWCYEAGEALSQENATLKELNVCRGDTLVITEGKLPPKGFLKIPIWWFKPSSHMKHGE
NGLDQVNGLACRMDDLQVSPAGDSPECIQTDTDLCYAGSIEIAGEATLEDLKMQYVLIWH
LLICHVQWL
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgtttggggacttatttgaagaggatttttcctttatttcaaacaatcattgcggaaaa
gggaagaaatcaaagcccagagattctgagcctccagctcccagagacttcaccaaccta
agcggtatcaaaaatcaaggtgggacctgctacctcaattcccttctgcagacgctgctt
ttcacacctgaatttagagaggcactgttctctctaggacctgaagagcttggaactctg
gatgatatcaataaaccagacgcaaaggttcgaataattccactgcaacttcaacggtta
tttgctcagcttctgctcttagaccagcaggctgcgtctacaacagaccttacagagagc
tttgggtggaacagcaatgaggaaatgaggcagcacgatgtgcaggaattaaatcggatt
ctgttcagtgctttggagacttctcttgtggggacttcgggtcacgaccttattaatcga
ttgtaccatggaactgttgtcaaccagattgtttgtaaagaatgcaagaatatcagtgag
agacaggaagatttcttagacctaacagtggcagtaaaaggtgtagctggcttggaggag
gccttgtggaacatgtatgtggaagaagagtactttgaaaatgagaacttgtatcgatgc
ggagcctgtgataaacttgttgaagcttcaaagtctgctaaactacgtaagttgcctccc
tttctcaccatttctctcctgagatttaactttgactttgagaagtgtgaacgatacaag
gaaactagttgctatacgttccctatccagataaacctgaggcctttttgtgagcagact
gaaatggatgattcagagtacatgtatgagctcttctctgttattatacataaaggtggc
tgctatggaggacactatcatgtttatatcaaagatgtggatgaattaggaaactggcaa
ttacaagaagatgaggataggctaattgaagataaggctttaagagagaatgaaaatgcc
aaagaagcagaaaatccactggcagtgttgaaagggattttatcagaggaagaatctaaa
caaatacctgtagatcaattagggcagaagttactggagaaaaaaaaggtgtcctggaat
aagaaataccgaaaacaatatggagcattacgaaagtatttgcaaaatcatcctcagata
tttcagttcagtcctgacaaaaataaggttggtctgaaggaaaaatacaagctcccattt
aagtcagattctcaaggacttgatctccaaagcccttctcagaagaatgatatccagtgg
aatttagaaaaaacacctacaaggctagaggagacttctgttggttgccattggtttgat
ctgaatgattcaaaagtccagccgatcaaggaggaggatattgagcaacaatttcagggt
aaagagagtgcctacatgctgttttatcgaaagtcacggctaaaaagacctcctgaagct
cgaggaaatccaagataccaaattcctgaacatcttctgaatgaaatgaatgctgctaat
actgagctgcaaaagaagagagcggaatgtgactcagcaaacaatggtattgatttgcat
ctccatttgagctcgtgttacaaattttacaatggagctttgcatccttcacttacttgg
aaagagagtgtactggatctgactattgacagaagaaaaactctaggagatcttcgacag
tcaatattccagatactggaatcttgggaaggagacatgattctcagtaatgccaaacct
ttaccagcaggactgcatctttacgagatccttgatggagatgagctgacactggactgc
tttgggctggctgatggagcagacatttttgtgtggaatgggaaagaggttggcggcata
aaggtgatgacaggccctgatcatgaacctgtgatcataaacgttcttcgtctggcagag
tataatgaaggagggaagggtcaacacttcacagaatcgcagcacatctttccgtgcagc
acaaaactggaggatctgcacagggccttagcaccgtcaggaggaatcatcttaaagaat
ggctcaggacctgatagagaaggcaagaactgggaagtacttcttgaagaacagatgaag
gaaacaatcagaagtgtcggtctgacggatggatgttcagtgctaatcttagacagccat
gaccagagctttgtgaatgtttcaagtggcaatttgactgcttttacatacgacatcagc
tggctccaagttaaaaacttctgcggaacggaagatgaagagaaacacgttaaaattact
gccaccattgaaacagtgatgtcagatatcaaaatgaaagcaatacaggagcttcaacta
gacgaagagctagcaagtgacagttgtcttagacctgttagtggaaatgggaaacttctc
tctccagtgcctgaagattatactgtcaaggaagcggaactgaaaatgggaagcttgctt
gggctgtgccggggaaaagctccaacttccacacagctcttcttatattttattattggg
catgaccaacatatgggccctgagatggagatagttgtggaagaaactgcctctgtgaaa
gaatgtctaaatttaatgctggaaaaatctggattatcaggtgacagctggcatttgaga
aggattgactggtgctatgaagcaggggaagcattaagtcaggaaaatgccactctgaag
gagcttaatgtttgtagaggagatactttggttataactgaaggaaagcttccaccaaag
ggctttctgaaaattcccatctggtggttcaagccttcaagccatatgaaacatggagaa
aatggactagaccaagtgaatgggttggcctgcaggatggacgatttgcaggtgtctcct
gctggagactcaccagaatgcatccaaacagacacggatctgtgttacgctggcagtata
gaaatagcaggcgaagccactttggaagatctgaagatgcagtatgttctgatatggcat
ttgcttatatgccatgttcagtggctatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (24)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   ENSEMBLRAPID (1)   
   OC (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (11)   
   RefSeq(nuc) (11)   
Protein domain (2)   
   Pfam (2)   
All databases (54)   

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