KEGG   Acanthaster planci (crown-of-thorns starfish): 110984281
Entry
110984281         CDS       T05078                                 
Name
(RefSeq) 5'-3' exoribonuclease 1-like
  KO
K12618  5'-3' exoribonuclease 1 [EC:3.1.13.-]
Organism
aplc  Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03008  Ribosome biogenesis in eukaryotes
aplc03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aplc00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    110984281
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110984281
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aplc03019]
    110984281
   03009 Ribosome biogenesis [BR:aplc03009]
    110984281
   03016 Transfer RNA biogenesis [BR:aplc03016]
    110984281
   03036 Chromosome and associated proteins [BR:aplc03036]
    110984281
Messenger RNA biogenesis [BR:aplc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     110984281
  mRNA degradation factors
   5'-3' decay
    5' exonucleases
     110984281
Ribosome biogenesis [BR:aplc03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    110984281
Transfer RNA biogenesis [BR:aplc03016]
 Eukaryotic type
  tRNA degradation factors
   Rapid tRNA decay (RTD) pathway factors
    110984281
Chromosome and associated proteins [BR:aplc03036]
 Eukaryotic type
  Gene silencing
   piRNA pathway
    110984281
SSDB
Motif
Pfam: XRN_N XRN_M XRN1_D2_D3 XRN1_D1 SH3_12
Other DBs
NCBI-GeneID: 110984281
NCBI-ProteinID: XP_022099990
UniProt: A0A8B7Z5C3
Position
Unknown
AA seq 2107 aa
MCNLFALRTYIYIRVLLIAEKSLTNVASVRKDNCFQISVHKMGVPKFYRWISERYPCLSE
VVKENQIPEFDNLYLDMNGIIHPCSHPNDEDVHFRITEEQIFEAIFHYIEVLFRIIKPRK
VFFMAVDGVAPRAKMNQQRGRRFRSAREAEERERQALAKGETLPAEKRFDSNCITPGTPF
MVRLQEQLKYFVRQKLTKDPMWQGLTVYLSGHETPGEGEHKIMDFIRSEKVRKDYDPNTR
HCLYGLDADLIILGLISHEPHFSLLREEVRFGKIANQKRPTAPEETTFHLLHLSLMREYL
EIEFSALKPQIDWFDVECIIDDWVLMGYLVGNDFIPHLPDMHISHNALPMLFKAYIEILP
SLGGYINEHGTLNLPRFEKYLVHLSKFDREKFEETFSDLSFFAGKTDIRAWKSSRVEAKK
EKEKERRAAKANSNQYALLDNFDEVMGLKLASGSEVAGQSPDSSQDADSSDQEDGDTFEE
EFKAHKSAYYNSKFEIDNITEFYPYHYAPYMSDLQGISNLDLKYEKGEPFLPFQQLLGVL
PAASKDLLPEPYQKLMTMENSPIIDYYPLDFDTDLNGKLQQWEAVVLIPFIDEERLLAAM
DSVSMHLTDEERSRNQHGPHLKHTYDKTLNYKYLSSLPGHFPDINACRVRYEELDKDIFH
LDPSMLQRGLRPGVKTGVYFPGFPTLHHLKFRTKLSKEEIKVFQQNSRGESIILTIKTEN
ADVTAEDVISEVFGKSCFAEWPHLKEVKVVAVADDTTRFELAESKQRSDQQAEKPSVKKL
DMSDGDAAAWVKDIKAIQDRYHKRKGVKIGPSYVLVYACPLMGRRYVSGHSGVVTLEKQW
SDTPVAYAYQMMVKDIAVHDSTFQQFKTLEEVFPKQSNCFMLGAPNYGCQGSVVDVEDGR
VRVTLSCPVEPDLNHLRNSQSHYEIQYLPAHILAQRLGLTSLIISRLSGSIFVGRGSKHS
SSVGASNNFNIGLNLKFNKTNQEIQGYSKKDESGTWLYSTKVIDIIRDYMAKFPEVFLRI
SKNPRAEAFFEDDLFDGQPGRMKELQDFIKALPCAKVSKVDVGLKNLDEPIIKLIEAEVK
KVAGLKVRKQKLCVRPHLLYKPLHYMGNLIPDLQVEHELFDRVINVKEGHTVPLGVRGVI
IGIQPGDTVLDCIYEIVFDEEFPGGLVIRCTGNRGYRLPTTAIINISYGMRKEQGQQQSN
KPTAVVKPQVFPQPNARTQSRGWYSDIIGRLGASLEQSCQSQRQKQQQRQSHTQVQSKPT
AAINYKEALSQKGSVKQETEQSSNSQASLPMKILTRSGPKVTARSPSKEPLPGKSSQSQR
IPPSFQKQEGTDSRKNTAKTEKVGQGQRKDAVSKSEVSTTRIRDKALSEEIRKIRSREDK
KAAEPEQSPANEVDEFAIMWQNLQKGSNNSGTSSPMTEDSAPDKESSPSDELTSPLASGG
QTPLSEEDMTGPSVQMQLALSALPKMEAPGPKVTGGETIVEEGDEEFEGEEFEVDEEARM
TPRTYAKSGTEELCRMLNISSVSDGDGTTKDIALPHSVVIEASTGKKQYGIPLTLDQLFA
GASLNNPPNSISPAPITPTSQASVPVPGGGSQPTPLHPHPLAQVSGPHPGLMKGPESSHP
GTVPTQPRPLPQAPGHATIPVKVGSHGVTFQPAYFPQGAVSPARLTVGNYSPQSGASPVQ
LLPHHTFQGTPLVTVNPGKPGMQHPASLMVQPVGQTPQQQLGVQQQAQQPIRMQGPGHQS
QAGVVKPVPTHADPHSPAYPQQQPTSVSANENTSNARLYPASAPQQQSASVAQGHTPGFH
VVTPRPFQTAPVPIAAPGRSHPGPQVMGSPSQPPNLRPRVPFPGQQHGQPPPQGFPARPQ
NAFEALLMWCHQRGLPQPLCHYQRNNTTGQVRGMVQLANGQQFFGPDCPSDVIAVDAAAH
MAMTNLTSQSPRSPMMQQMRPTTRPTLGPMGPPSGPMIHTSGPNPFVPLQVTKQLNSPQR
LTSIEAEATSGTTPPRQQMEYPAQAPPSQGAPPSSRVDLAATDQSGIKDNSHQSSRRELD
FGSSTVNTVAHSTEVVASVEHRKPSIDETLGAVHSERRASTGGPARHRRVSSKAKLAINF
GGKPEQD
NT seq 6324 nt   +upstreamnt  +downstreamnt
atgtgcaatctgtttgccttgcgtacgtacatatatatacgtgtgttgctcattgctgaa
aagtccctcaccaacgttgcttcagtaagaaaggacaattgttttcaaatttcagttcac
aaaatgggtgttcctaagttttatcgctggatcagcgagcggtatccgtgcttgagtgaa
gtagtcaaggagaatcagattcctgaatttgataatctctacctggacatgaatggtatc
atccacccgtgctcgcatcccaatgatgaagatgtccacttccgcatcactgaagagcaa
atctttgaggccatattccattacattgaggtgctgtttcgcatcatcaagccccgtaag
gtgttcttcatggcggtggacggcgtggcccccagggccaagatgaaccagcagcggggg
aggcggttccgctcagccagggaggcggaggagcgggagcggcaggcccttgccaagggg
gaaacgctgccggccgagaagcgctttgactccaactgcatcacccccggcacgcccttc
atggtgcgcctccaagagcaactgaagtactttgtgcggcagaagctgaccaaggatccc
atgtggcaagggctgacagtttacctctcagggcacgagactcctggtgaaggggaacac
aagattatggacttcatacgctcagagaaagttcgaaaggactatgaccctaacaccaga
cactgcctctacggcctagatgcagacctgatcatactgggcctcatatcccatgaacct
cacttctcccttctccgcgaggaggtgcgattcggcaagattgccaatcagaagcgacct
acagccccagaagagacgacctttcacctcttgcacttgtctctaatgagggagtacctg
gaaattgagttcagtgcactcaagccgcaaatcgactggtttgatgtggaatgcatcatc
gacgactgggtgctcatgggatatctcgtcggtaacgacttcatccctcacttgcctgat
atgcacatatcccacaatgctctgccgatgctgttcaaggcctacatcgagatcctgccc
tcgcttggtggttatatcaatgagcacgggacactaaacctgccccgttttgagaaatac
ctggtccatctatccaagtttgacagggagaagtttgaggagacattttccgacctttcc
ttctttgctgggaagacggacattagagcctggaaaagcagccgggtagaagccaaaaaa
gaaaaggagaaagaaagacgcgctgccaaggccaactccaaccaatatgctctgctggac
aactttgatgaagtgatgggtctcaagctggcctctgggtcagaggtcgctggtcagtca
cctgactcaagtcaagatgcagattcctctgatcaggaggatggtgatacgtttgaagaa
gagttcaaagctcacaagagtgcctactataacagcaagtttgaaatagacaacatcaca
gagttctacccttaccactacgccccttacatgtcagacctacagggaataagcaacttg
gatctcaagtacgagaaaggtgagccgttcttgcccttccagcaacttctgggtgtgctg
cctgcagcaagcaaagacttgcttcccgagccataccagaaactgatgaccatggaaaac
tcccccattattgactactacccattggactttgacaccgacctcaatggcaaactgcaa
cagtgggaagcagtggtgctcattccattcatcgatgaggaacgtctcctcgcggcgatg
gacagcgtcagcatgcacctgactgatgaggaacgaagtcgtaatcagcatgggccccac
ctcaagcacacctacgacaagacactcaattacaaatacctgtcctctctacctgggcac
ttccccgacatcaatgcctgccgggtcaggtatgaggagttagacaaggacatctttcac
cttgatcccagcatgcttcaacgaggcctgcgtccaggcgttaagacaggtgtttacttc
cccggcttccccacgttgcatcatctgaaattcagaaccaaactcagcaaagaggaaatt
aaagtcttccagcaaaacagccgaggcgagagcatcattcttaccatcaaaacagagaat
gctgatgtgacggcagaggatgtaatcagtgaagtgtttggtaagtcctgctttgctgaa
tggccgcatctgaaagaagtcaaagtggtggctgtggcagatgacacaactaggtttgaa
cttgctgagagcaaacagaggagtgaccaacaggcagagaagcccagtgtcaagaaactt
gacatgtccgatggggacgctgctgcctgggtcaaagatatcaaggccatacaagacaga
tatcacaagaggaaaggagtgaagatcggtccgtcatacgtcttggtctacgcctgccct
ttaatgggaagacggtatgtgagtggacacagtggagtggtcactctggagaagcagtgg
tcagatactccggtagcctacgcatatcagatgatggtcaaggacatagccgtgcatgac
tcaactttccagcagttcaagaccctggaagaggtcttccccaagcagtctaactgcttc
atgctgggagcgcccaactacggctgccagggaagtgtggtggatgtggaggatggacga
gtccgtgttacgctctcctgtcctgtagagccagatttgaatcacctcaggaactcacag
agccattacgagattcagtacctccctgctcacatcttagcccagcgtcttggcttgaca
tctctcatcatctcccgtttatctggcagcatctttgttggcagaggatccaagcacagc
tcctctgtgggtgcctcaaataacttcaatatcggcctcaatctgaaattcaataagacc
aaccaggagatccagggttactctaagaaagacgagtcgggaacatggttgtactcaacc
aaggtcatagacatcatcagagactacatggcaaagtttccagaagtgttcttgcgcatt
agtaagaatccaagagcagaggcgttctttgaagatgacctgtttgatgggcagcctggt
cgaatgaaagagctacaggacttcatcaaggccctgccgtgtgccaaggtctccaaggta
gatgtgggcctgaagaacctggatgagcccatcatcaagctgattgaggccgaggtgaag
aaggttgctggattgaaagtcagaaagcaaaaattgtgtgtccgaccacaccttctctac
aagcctcttcattacatgggcaacttaatcccagacctgcaagtggagcacgaactgttt
gatcgcgtcatcaacgtcaaggagggccacactgtgcctctaggcgtacgaggagtcatc
attggaatacagccgggtgacactgtgcttgactgtatctacgagattgtgtttgatgag
gagtttcctggtggtctggtgatccgttgcaccggtaaccgtggttacaggctcccgacc
acagccatcataaacatatcgtacgggatgcgcaaggaacagggccaacagcagagcaac
aagccaacagccgtcgtcaaaccacaggtattcccgcaacccaatgcccgaacgcagagt
cgcggctggtactcggacataatcggtaggctgggtgcttcacttgagcagtcttgccag
agccagcgacaaaaacagcagcagcgccagtcacacacacaggttcagtccaagccaacc
gcagcaatcaattacaaggaggcgttatcacagaaaggtagtgttaaacaagagacggaa
cagagttctaattcacaggcatcactgcccatgaagatcctgacacggtcaggacccaag
gtgactgcgcgttccccctctaaggaacctctcccggggaagagctcacagtctcaaaga
atccctccgagcttccagaagcaggaggggacagacagcaggaaaaatacagcaaagaca
gaaaaggtcggacaggggcagaggaaagatgcggtctccaaatcagaggtgtcaacaacg
agaatccgtgataaggctctcagcgaggagattcgcaagattcgaagtcgggaagacaag
aaagctgctgagccagagcagtccccggccaacgaggtggacgagtttgccatcatgtgg
cagaacctgcagaaagggtctaacaacagcggcacctcctcccccatgactgaggactcc
gcccctgacaaggagagcagcccgagtgatgagctgacctcccccttggcctcgggaggc
cagacacctctgtcagaggaggacatgacggggccctccgtccaaatgcagctggccctg
tctgcactgcccaagatggaggctcctgggccaaaggtcacagggggtgagaccattgtt
gaggaaggggatgaggaattcgagggtgaagagtttgaagtagatgaagaagcacggatg
actccaagaacatatgcaaagtctggaacagaggagctgtgtcgaatgctgaacatttcc
tcggtgtccgatggcgacggtacaaccaaggatattgctttgcctcactctgtcgtcata
gaagcgtcaacaggcaagaagcagtatggcataccactcacccttgatcagctctttgca
ggtgccagtctgaacaatcctccaaatagtatatcaccagcgccgattactccaaccagt
caggctagtgtaccagtgcctggtggagggagccaacctacaccactccatccccacccc
ctggctcaggtgtccggtccccaccctggactcatgaagggtcccgagtcctctcaccca
ggcactgttcccacccagccaaggccattaccccaggccccaggccacgctacgatccct
gtaaaggtgggatctcacggtgtcacgtttcagccagcctactttcctcaaggtgctgtg
tctcccgcgaggttgactgtagggaattactcaccccagtcaggtgcctcgcctgtccag
cttttgccccaccacacgtttcaagggactcctttagttactgtcaatcctgggaagcca
ggcatgcaacaccctgcaagcttaatggtgcagcccgttggacaaacaccacagcagcag
ttgggagttcagcagcaggcgcagcagccaatcagaatgcaaggtcctggccaccaatcc
caagccggtgtggtgaaaccagtacccactcatgcggatccccactcccccgcatatcct
cagcaacagccgacaagcgtctctgccaatgagaacacgtccaacgccagactgtatccg
gcatcagcacctcagcagcagagtgcaagtgtggcccaaggacacacccctggatttcac
gttgtcacgccgcggccatttcaaacagccccggtgccgatcgcagccccggggagatcg
cacccgggcccccaggtgatgggctccccatcgcaacctcccaacctccgacccagggtt
ccgttccctgggcagcagcatggacaacctccaccccagggcttcccagcgaggccccag
aatgccttcgaggcgttactaatgtggtgtcatcaaaggggtctgccgcaaccactgtgc
cattaccagagaaataataccacgggtcaggtacggggtatggtgcaattggctaacggt
cagcagttctttggtccagactgcccatcagatgtcatagccgtagatgctgcagcccac
atggcaatgacaaacttaacatcgcaatcaccaagaagtcccatgatgcaacagatgagg
cctaccacgcgcccaacactcggtccgatgggtccaccatcaggacctatgattcacacc
agtggaccaaacccgttcgtgcctctgcaggtaaccaagcaactaaattccccacagaga
ttgacatctatagaggcagaagctacatcaggtacgacaccccccagacaacaaatggaa
taccctgctcaggctccaccgtcccagggtgcacccccttctagcagagtggacctggcc
gcaacagaccaatcagggatcaaggataattcccaccaaagctcccggagggagctcgac
tttggcagcagtaccgtcaacaccgtcgcacacagcactgaagtggttgcgtctgtggag
catcgaaaaccaagcatagatgaaacattgggagcagtccattcagagcggagggcgtcc
actggtggtcctgccagacaccgccgagtttcctccaaggccaaacttgccattaatttt
ggtgggaaacctgaacaggattga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (75)   
   KEGG ORTHOLOGY (1)   
   RefGene (71)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (91)   

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