KEGG   Alpha proteobacterium HIMB5: HIMB5_00004130
Entry
HIMB5_00004130    CDS       T02250                                 
Name
(GenBank) NAD dependent epimerase/dehydratase family protein
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
apm  Alpha proteobacterium HIMB5
Pathway
apm00521  Streptomycin biosynthesis
apm00523  Polyketide sugar unit biosynthesis
apm00525  Acarbose and validamycin biosynthesis
apm00541  O-Antigen nucleotide sugar biosynthesis
apm01100  Metabolic pathways
apm01110  Biosynthesis of secondary metabolites
apm01250  Biosynthesis of nucleotide sugars
Module
apm_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:apm00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    HIMB5_00004130
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    HIMB5_00004130
   01055 Biosynthesis of vancomycin group antibiotics
    HIMB5_00004130
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    HIMB5_00004130
   00525 Acarbose and validamycin biosynthesis
    HIMB5_00004130
Enzymes [BR:apm01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     HIMB5_00004130
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 adh_short DUF4952
Other DBs
NCBI-ProteinID: AFS47181
UniProt: J9YW84
Position
complement(384704..385717)
AA seq 337 aa
MKKIIVTGGLGFIGSNLIDLLLEKKYSVINIDKVTYSSNFYNTKSHIKNKNYKFIKCDIK
DKKLKKILFKYKPSCIFNLAAETHVDRSIDNPECFIQSNIVGVYNLLECFKEFTKKHKSK
LVHISTDEVYGDILSGRTSETYPYQPSSPYAASKAASDHLVSSYIRTYKIPAIVTNCSNN
YGPKQHPEKLIPKLIYNILNNKPLPIYGKGTNSREWIYVKDHCEALIKVFLKGKIGEFYN
IGSNKNLNNLQVCSQLLNVSKKLVKLGSDVKINFVKDRPGHDIRYALNSNKIIKKLGWKP
KVNFARGIKLTFEWYKKNKTYYKSLSKKDIIKRLGRT
NT seq 1014 nt   +upstreamnt  +downstreamnt
atgaaaaaaataatagtaactggtggattaggttttattggaagtaatctaatagattta
ttattagaaaaaaaatactcagtgataaatatcgataaagttacttattcatcaaatttt
tataacacaaagagtcacattaaaaataaaaactataaatttataaaatgcgacattaaa
gataaaaaactaaaaaaaattctttttaaatataaaccttcttgtatttttaatttagca
gcagaaactcatgttgatagatcaatagataacccagaatgctttattcaaagtaatata
gttggggtttataatttattagagtgtttcaaagaatttacaaaaaaacacaagtcaaaa
cttgttcatatttcaactgatgaagtttatggtgatattttatctggaagaacatctgag
acatatccttaccaaccaagctcaccttatgcagcaagcaaagcagcttcagatcattta
gtaagttcttatataagaacatataaaattccagctattgtaacaaattgttcaaataat
tatggaccaaagcaacatcctgaaaaattaataccaaaattaatttataatattttaaat
aataaacctttacctatttatggaaaaggaacaaattcaagagaatggatttatgttaaa
gatcattgtgaagcattaataaaagtttttttaaaaggtaaaattggagagttttataat
attggttcaaataaaaatttaaataatttacaagtttgttctcaacttttaaatgtttca
aaaaaactagtaaagcttggtagtgatgtaaaaataaattttgttaaagatcgtccaggt
catgatatcagatacgcgttaaacagtaataagattattaaaaaattaggatggaaacct
aaagtaaattttgcacgaggaattaaattaacatttgaatggtacaaaaaaaacaaaact
tactataaaagtttatcaaaaaaagatattattaaaagattaggaagaacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5599)   
   KEGG ORTHOLOGY (1)   
   RefGene (5596)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (5624)   

Download RDF
DBGET integrated database retrieval system