KEGG   Archaeoglobus profundus: Arcpr_0060
Entry
Arcpr_0060        CDS       T01152                                 
Name
(GenBank) SMC domain protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
apo  Archaeoglobus profundus
Brite
KEGG Orthology (KO) [BR:apo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apo03400]
    Arcpr_0060
DNA repair and recombination proteins [BR:apo03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Arcpr_0060
    Archaeal homologous recombinant proteins
     Arcpr_0060
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 Rad50_zn_hook AAA_13 AAA_29 AAA_27 Fib_alpha Snapin_Pallidin AAA_21 DUF1664 DivIC WXG100 Prominin DUF3450 DUF4201 ABC_ATPase SbcC_Walker_B DUF948 FlaC_arch Prefoldin GAS
Other DBs
NCBI-ProteinID: ADB57136
UniProt: D2RFR1
Position
49262..51868
AA seq 868 aa
MLIKYVEIENFKSHRSSRVEFDRGVNLIVGRNGAGKTSILEAIAVALYGVKHGVKPSGVK
KDDLIRDSASRYEIRLGFDFNGRDCLIVRSSDGNSYLRCDKLLEGDERIREWVERNVAPS
HVWLNAIYVRQGEIDEIVKDDERREKIIKRITQIEDYERAWENLGKVIKHFKEEKSRLEK
EIKAESDVENRIKEVKEELEAKKRELDKKMIELRDVEEKLAEAEAEKERVEKLREKFEEL
NREKESIEKHAGKIEERIRGLRERRNGLKKEIEELKSRVRRLEEIRGYAEKYIELREEYE
KTLKVERELKETLARLESERNGVIRLLSDLENKKKRLNELKGKLEEVEKRKSEIEGKALK
YEEIKVKLERLRELEKTCRPLEEIERELEEVERAKLKLKDVEKDERNLLDMKARLESEIE
RLKEALNALKSAKGVCPTCGRLLSEDDRLNLIKSYTKKLENVRKDLIEIENKLEDIKNVK
KELESVISEESRILREYELAKELENLKKSTKGFEEAEAAWKEYRKLEELALKLSADISVI
ESDLKSEQELNSKLIELNSKIDEVEEKLSNLKKIDESTLKELESYYNEFNRLVSAKHDLE
RKLEELKSCESEIVKAEDELSETLKRLESLKNEIEALGYSDETYRNVYNLYTELRSRYFG
LREGVERLKDHIKTLEKSAEDLENRVKKLREKRERVEKIGREVLPKLEEIREKFRKYKVS
LTEYAFKEVEKIASEIFEEMTDGKYSGIVLKREEKRKEKVTVKVLYQGAERDISFLSGGE
LIALGLAFRLALSVFMIQGKIPLLILDEPTPFLDDERRRKLVDIMNRYLKKIPQVIVVTH
DEELRDVADKVIRVELHGGVSKVMEGFE
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgctcataaagtatgtggaaattgagaacttcaaatcacacagaagttcgagggtggaa
tttgatagaggtgtaaatctcatagttggtaggaacggtgctggtaagacatctattctt
gaagccatagccgtagcactttacggtgttaaacacggtgttaaaccttctggggttaag
aaagacgatctgatcagagattctgcaagcagatacgagataagactaggtttcgatttt
aacggtcgcgattgtctgatagtgagaagtagcgacggaaactcctacttgagatgtgac
aaactcctcgaaggtgatgaaaggatcagagagtgggtggaaagaaacgtagctccctct
cacgtgtggttgaacgccatatacgttagacagggagagattgatgagatagtcaaggat
gacgagaggagggagaagataatcaagagaataacgcagatagaggattacgaaagggct
tgggaaaatctgggtaaggtgatcaagcacttcaaggaagagaaaagtaggctcgaaaag
gagattaaagctgaaagcgatgtagaaaacaggatcaaagaagtgaaagaggagcttgaa
gcaaagaaaagagagcttgataaaaaaatgattgagctaagagatgttgaagaaaaatta
gctgaagctgaggctgagaaggagagagttgaaaagttgagagagaagttcgaagagctg
aatagagagaaggaaagcattgagaaacacgctggaaagattgaagaaagaatcagaggt
cttagggagagaagaaacggcttaaagaaggaaattgaggagcttaaatcgagggttagg
aggcttgaggaaataaggggatatgctgaaaaatacattgagcttagagaggagtacgag
aaaactttgaaagtggaaagggagcttaaggaaaccttggcaagacttgagtcggaaagg
aatggagtaatcagattgttaagcgatcttgagaataaaaagaagagattgaacgaattg
aaaggtaagcttgaggaagttgaaaaaaggaagtctgaaatcgaaggcaaggctttgaaa
tacgaggagataaaggtaaaacttgaaagattgagggagcttgaaaaaacttgtagacct
ttagaggagatcgaaagagagcttgaggaagttgaaagagctaagttgaagcttaaagat
gttgagaaagatgaaaggaatttgctggatatgaaagcaagattagaaagcgaaattgag
aggttgaaagaagctttgaatgcattaaaatccgcgaaaggtgtttgtccgacatgtggt
aggcttctgagtgaagatgatcgcttaaatctcataaaaagttacacgaagaagttagaa
aacgttagaaaagatttgattgaaatcgagaataaattggaggatataaagaacgtaaag
aaagaacttgaaagcgtaatttcggaggaaagcaggattttaagggaatatgagcttgct
aaggagttggaaaatttaaagaagtctactaagggtttcgaagaagctgaagctgcttgg
aaggagtacagaaagctagaagagttggccttgaagctgtctgctgacatatcagtaata
gaatctgatcttaaatctgaacaggagttgaactcaaagttgattgagctaaactcgaag
attgatgaagttgaagaaaaattgagcaatctgaaaaaaattgatgaaagcactttgaaa
gagcttgagtcttattacaacgagtttaacagacttgtaagtgcgaagcacgatttggag
agaaagcttgaggaactgaaatcttgtgaatctgaaatcgtcaaagctgaagatgaactt
tcagaaaccctaaaaaggctggaaagcttgaaaaatgagatagaagctcttggctatagt
gatgaaacttacaggaatgtttacaacctatatactgaactgaggagtagatacttcggt
cttagagagggcgttgagagactcaaagatcatataaaaaccctcgagaaaagtgctgag
gatttggaaaatagggtgaagaagcttagggaaaagagggagagagttgagaagataggc
agagaagtgttaccaaagcttgaagagataagagaaaaattcagaaagtacaaggtaagt
ctgacggaatacgctttcaaagaagttgagaaaatagcaagtgaaatttttgaggaaatg
accgatggaaagtattcgggaatagttcttaagagagaggaaaaaaggaaagagaaggtc
acagtaaaggtgttgtatcagggtgctgagagggacataagcttcctaagtggtggagaa
cttattgctctcggcttagccttcaggttggctctttcggttttcatgattcaggggaag
attccactgcttattctggatgaaccgactccattcttggacgatgagagaaggagaaag
ctcgtggatataatgaaccgctatctaaagaagattccacaggttatagtggttactcac
gatgaagaacttagagacgttgctgacaaagttataagggtggagttgcacggcggagtt
tctaaggttatggagggttttgaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (22)   
   Pfam (22)   
All databases (29)   

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