KEGG   Arcobacter porcinus: APORC_0003
Entry
APORC_0003        CDS       T06395                                 
Symbol
gyrB
Name
(GenBank) DNA gyrase, subunit B
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
apoc  Arcobacter porcinus
Brite
KEGG Orthology (KO) [BR:apoc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apoc03032]
    APORC_0003 (gyrB)
   03400 DNA repair and recombination proteins [BR:apoc03400]
    APORC_0003 (gyrB)
Enzymes [BR:apoc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     APORC_0003 (gyrB)
DNA replication proteins [BR:apoc03032]
 Prokaryotic type
  DNA Topoisomerases
   APORC_0003 (gyrB)
DNA repair and recombination proteins [BR:apoc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      APORC_0003 (gyrB)
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c GyrB_hook HATPase_c_3
Other DBs
NCBI-ProteinID: QEP39645
UniProt: A0A1C0AXY1
Position
2556..4877
AA seq 773 aa
MSQQEYGASNIKVLKGLEAVRKRPGMYIGDTNINGLHHLIYEVVDNSIDEAMAGYCKNIK
ITLTKDGRARIEDDGRGIPTAIHPTEGVSAATIALTVLHAGGKFDKDTYKVSGGLHGVGV
SVVNALSKDLKMTIYREGKIHQQVFSEGIPKNTLEIIGDSPRKTGTTIDFLVDDTIFEVT
KYEFAILAKRFKEVAYLNPFITITLEDENINKKEVYHFEGGIKQFVEDLNKETALCEVIA
FSDKVDGVEVDIALMYNDTYIEKTLSFVNNIRTIDGGTHEAGFKAGLTRSISKYLNENAS
AREKDVKITGDDVREGLITVVSVKVPEPQFEGQTKGKLGSSYVRPITQKLTGDNLDKYFE
ENPVHAKAIMEKALMAARGREAAKKARELTRKKDSISIGTLPGKLADCQSKDPAIKELYL
VEGDSAGGSAKQGRDRVYQAILPLKGKILNVEKSRLDKILKSDEIRNIITALGCGIGEDF
DEEKVRYHKIIIMTDADVDGSHIQTLLLTFFFRFLKPIVEKGYLYIAQPPLYRYKKGKNE
IYLKDNAALSSYLIENGLESFEFQGMGYNDLLDLFKQVARYRAMLEQLAKRYSLLEVLKH
LIENSDLVNLEFVDLYEKVKEFIESKGHNILSKVITEDKIQLFVQTKEGLEELIIDNDLF
ASPYFSESTFIFNKLKERDLTLFEGKDLIELLEDIENLAKKGAYIQRYKGLGEMNPEQLW
ETTMTPDNRRLLRVKIEDAEIASDTFTLFMGDEVEPRRNYIESHAKEVEHLDV
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgtcacaacaagaatatggtgcaagtaatattaaagttttaaaaggtcttgaagctgtt
agaaaaagacctgggatgtatattggtgatacaaacataaatggacttcaccacttaatt
tatgaagttgttgataactctattgatgaagcgatggctggatattgtaaaaatatcaaa
attactttaacaaaagatggaagagcaagaattgaagatgatggaagaggaattccaaca
gcaattcacccaacagaaggagtaagtgcagcaactattgctttaacagttcttcacgct
ggtggtaaatttgataaagatacttataaagtttcaggaggacttcacggagttggagtt
tctgttgtaaatgctttatcaaaagatctaaaaatgactatttatagagaaggaaaaatt
caccaacaagtatttagtgaaggtattccaaaaaatactcttgaaattattggagatagt
cctagaaaaacaggaacaacaattgattttttagtagatgatactatttttgaagttaca
aaatatgagtttgctattcttgctaaaagatttaaagaagttgcatatttaaacccattt
attacaattactcttgaagatgaaaatataaataaaaaagaagtttatcattttgaaggt
ggaattaaacagttcgttgaagatttaaataaagagacagctttatgtgaagtaattgca
tttagtgataaagttgatggagtagaagttgatattgctttaatgtataacgatacttat
attgaaaaaactctatcttttgtaaataatattagaacaatagatggtggaactcacgaa
gctggatttaaagcaggacttacaagatctatttcaaaatatttaaatgaaaatgcaagt
gcaagagaaaaagatgtaaaaatcacaggtgatgatgtaagagaaggattaattacagtt
gtttcagttaaagttcctgaaccacaatttgaaggacaaacaaaaggaaaattaggaagc
tcttatgtaagaccaattactcaaaaattaactggagataatttagataaatattttgaa
gagaatccagttcatgcaaaagctattatggaaaaagctttaatggcagcaagaggaaga
gaagcagctaaaaaagcaagagaacttactagaaaaaaagattcaattagtattggaaca
cttccaggaaaacttgctgattgtcaaagtaaagatccagcaatcaaagagctatattta
gtggaaggggattcagctggaggttcagcaaaacaaggtagagatagagtttatcaagca
attttacctctaaaaggtaaaatccttaatgttgaaaaatcaagacttgataaaatttta
aaatctgatgagattagaaatatcattacagcacttggttgtggaattggtgaagatttt
gatgaagagaaagtaagatatcataaaattataattatgaccgatgccgatgttgatggt
agccatattcaaactctacttttaacatttttctttagattcttaaaaccaatagttgaa
aaaggttatttatatatcgctcaaccaccactttatagatataaaaaaggtaaaaatgag
atttatctaaaagataatgcagctttatcttcatacttaatagaaaatggtttagagagt
tttgaattccaaggaatgggttataatgatttattagacctatttaaacaagttgcaaga
tatagagcaatgcttgaacaacttgcaaaaagatactctcttttagaggtattaaaacac
ttaattgaaaatagtgatttagtaaatttagagtttgttgatttatatgaaaaagtaaaa
gagtttattgaatcaaaaggacataatattttatcaaaagttataacagaagataaaatt
caactatttgttcaaactaaagagggacttgaagagttaattatagataatgatcttttt
gcatctccatattttagtgaatctacattcatttttaataaattaaaagagagagattta
actctttttgaagggaaagatttaattgaattattagaagatatagaaaatcttgctaaa
aaaggtgcatatattcaaagatataaaggtcttggagagatgaatccagaacaactttgg
gaaacaactatgacacctgataatagaaggcttttaagagtaaaaatcgaagatgcagag
attgctagtgatacatttacactatttatgggtgatgaagttgagccaagaagaaactat
attgaatcacatgcaaaagaagttgaacacttagatgtttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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