KEGG T05443: DDU33

Actinobacillus porcitonsillarum: DDU33_06420

Entry

DDU33_06420       CDS       T05443

Name

(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC

K03212

23S rRNA (uracil747-C5)-methyltransferase [EC:2.1.1.189]

Organism

apor Actinobacillus porcitonsillarum

Brite

KEGG Orthology (KO) [BR:apor00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:apor03009]
    DDU33_06420
Enzymes [BR:apor01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.189  23S rRNA (uracil747-C5)-methyltransferase
     DDU33_06420
Ribosome biogenesis [BR:apor03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    DDU33_06420

SSDB

Motif

Pfam:

tRNA_U5-meth_tr Methyltransf_31 MTS Methyltransf_25 Methyltransf_4 Methyltransf_32 Methyltransf_12 Methyltransf_15 UPF0020 Cons_hypoth95

Other DBs

NCBI-ProteinID:

AWI51134

UniProt:

A0A2U8FLB3

Position

1317483..1318658

AA seq 391 aa
MNITCEHFNQQRCTSCQWLLTEYNVQIADKMAELKRLILPYLLQNQTEVLSPVASEQTHF
RNKAKMVVSGSVERPVLGLLKDQQDAQSGVDLTDCLLYPTEFATLFPVLKDFIGRAGLVP
YNIAKKKGELKYILLTQSQYNQAVSLRFVLRSTQKQPLIERELPKLLEKLPPKSIVSLNI
QPQHAAILEGETEIFLTPERVIEENFNGIPLFIRPQGFFQTNPKVASELYKTAQMWVKTL
PIQQCWDLFCGVGGFGLHCAKVLQETNPEVSLTGIEISASAIASATQSAEKLGLKNITFA
SLDSAQFALNEKGSVPDLVIVNPPRRGIGKALAEYLNQLGSPYVIYSSCNAKTMAEDFAS
FDNYVLAKVQLFDMFPHTAHYEVLTLLVKKA

NT seq 1176 nt +upstreamnt +downstreamnt
atgaatataacttgtgagcattttaatcaacaacgttgtacttcgtgccaatggttattg
accgagtataacgtgcagatagctgataaaatggcagagctcaagcggttgattttgcct
tatcttttgcaaaatcaaaccgaagttctttcgccagtggcttcggaacaaacacatttt
cgtaataaagctaaaatggtagtaagtggttcggtagagcgaccggtacttggcttatta
aaagatcagcaagatgcacaaagtggtgttgatttaacagattgtctgctttatccgacg
gaatttgcaacgctttttcctgttcttaaagattttattggcagggcaggcttagtgcct
tataacattgctaaaaagaagggcgagctaaaatatattttgctgacacagagccaatat
aatcaggctgtttcattacgtttcgtcttgcgttcaacacaaaaacaaccgcttattgaa
cgagaattgccaaagttactggaaaagctaccgcctaaatctattgtgagtttgaatatt
cagccgcaacacgccgctattttagagggagaaaccgagatttttcttacccctgaaagg
gttattgaagaaaattttaatggtattcctctgtttattcgtccgcaaggttttttccag
actaatcctaaagtggcaagcgaattatacaaaaccgcacaaatgtgggtaaaaacgtta
cctattcaacaatgttgggatcttttttgtggcgtgggaggatttggcttacattgtgca
aaagtattgcaagaaaccaatcctgaagtaagtttaacgggaattgaaatttcggcttca
gcgatagccagtgcgacacaatcggcagaaaaattagggttaaaaaatatcacctttgct
tcattagattccgcacaatttgctttgaatgagaaaggaagtgtgccggatctcgtgatt
gtaaacccgcctcgtcgggggattggtaaggcgcttgcagaatatttaaatcagctcggt
tcgccttatgtgatttattcgagctgtaatgcgaaaacaatggcggaagattttgcttca
tttgataactatgtattagcaaaagtgcagttatttgatatgttcccacatacggctcat
tatgaagttttgactttattagtaaagaaagcttaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (10)   
   Pfam (10)   
All databases (19)   

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