KEGG   Actinobacillus porcitonsillarum: DDU33_08505
Entry
DDU33_08505       CDS       T05443                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
apor  Actinobacillus porcitonsillarum
Pathway
apor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DDU33_08505
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apor03019]
    DDU33_08505
Enzymes [BR:apor01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     DDU33_08505
Messenger RNA biogenesis [BR:apor03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     DDU33_08505
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_22 CMS1
Other DBs
NCBI-ProteinID: AWI51518
UniProt: A0A2U8FKN9
Position
complement(1763311..1764525)
AA seq 404 aa
MSQHLTEQRFIDFSIHENVLAALESKGFEFCTPIQAKTLPITLKGNDIAGQAQTGTGKTM
AFLIATFHHLLTNECQSKKNQPRALILAPTRELAVQIASDAELLVKHSDLKLALAYGGDG
YEKQVEAIEKGVDILVGTTGRVIDYVKQGIINLDCVQVIVLDEADRMFDLGFIKDIRYLM
RKCPKPEQRLTMLFSATLSPRVRELAYEDMNNASYVEIEPLQRTGHRIKEELFYPSNEDK
MALLLTLLEEEWPERCMIFANTKQKCEEIWQYLLADGHRVGLLTGDIAQKKRLALLDSFT
KGELDILVATDVAARGLHIPEVTHVFNYDLPDDREDYVHRIGRTGRAGQSGHSISFACER
YAVNLPAIEEYIGHSIPVSQYDSQALLALPKVKRAPRFNRNVKR
NT seq 1215 nt   +upstreamnt  +downstreamnt
atgtcccagcatttaacagaacaacggtttattgacttttcgatccacgaaaatgtatta
gccgccttagaaagtaaaggatttgaattctgtacaccgattcaagcaaaaacattaccg
atcacgttaaaagggaatgatattgccggacaagcgcaaacaggtacaggaaaaacgatg
gcgtttttaattgcaacgttccaccatttgctgactaacgaatgccaaagcaagaaaaat
caacctcgagcattgattttagcccctacacgtgaattagccgtacaaattgcctctgat
gccgagctgttggttaaacattcagatttaaaattggccttagcttatggtggcgatggt
tatgagaaacaggttgaagccattgaaaaaggcgttgatattcttgttggtactacaggt
cgtgttattgattacgtaaaacaaggaatcatcaacttagattgcgttcaggtcattgta
ttagatgaagcggatcgcatgtttgatcttgggtttattaaggatattcgttacttaatg
cgcaaatgccctaaaccggaacaacgtttgacgatgttattttccgcaacattatctcct
cgagtacgagaactcgcttacgaagatatgaataatgcttcctatgtcgagatagaaccg
ttacaacgtactgggcatcggattaaagaagaacttttttatccgtctaatgaagataaa
atggcgctacttcttaccttattagaggaagaatggccagagcgttgtatgattttcgca
aataccaaacaaaaatgtgaagaaatttggcaatacttgcttgctgatggtcatcgagtg
ggattattaacgggagatattgctcagaaaaaacgcttagcgttattagatagctttaca
aaaggggaattggatattttagtcgcaacagatgttgctgcgcgtggtttgcatattcct
gaagtgactcacgtctttaattacgatttacctgatgatcgtgaagattatgtacaccga
attggacgaaccggtcgagcagggcaaagtggacattctattagttttgcctgtgagcgt
tatgcagtaaatttaccggcaattgaagaatatatcggacattctattccggtcagtcaa
tatgatagccaagcactattggctttgcctaaagtaaaaagagcaccaagatttaatcgg
aatgtgaaacgataa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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