KEGG   Ancylobacter pratisalsi: G3A50_00295
Entry
G3A50_00295       CDS       T06476                                 
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
apra  Ancylobacter pratisalsi
Brite
KEGG Orthology (KO) [BR:apra00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apra03032]
    G3A50_00295 (topA)
   03400 DNA repair and recombination proteins [BR:apra03400]
    G3A50_00295 (topA)
Enzymes [BR:apra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     G3A50_00295 (topA)
DNA replication proteins [BR:apra03032]
 Prokaryotic type
  DNA Topoisomerases
   G3A50_00295 (topA)
DNA repair and recombination proteins [BR:apra03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      G3A50_00295 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim zf-C4_Topoisom HC2 S1_2
Other DBs
NCBI-ProteinID: QIB32315
UniProt: A0A6P1YGS4
Position
57518..60205
AA seq 895 aa
MQVVIVESPAKAKTINKYLGPGYEVIASYGHVRDLPAKDGSVDPEHDFHMLWDVDPKSQK
RLSDIAKAVRGADGLILATDPDREGEAISWHVLEVLKEKRALKDQPVSRVVFNAITKQAV
LEAMKNPRMIDAALVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRLVCDR
EREIETFITREYWSIAARLATPRGDEFEARLVGADGKKITRLDVGTSEEAMAFRQALESS
DYKVRSVEAKPARRHPYPPFTTSTLQQEASRKLGFAPAITMRIAQRLYEGVDIGGETVGL
ITYMRTDGVDMAPEAIASARSVIGRDYGDRYVPSVPRKYTAKAKNAQEAHEAVRPTDLGR
RPKDVLRLLEGDQAKLYELIWLRTIASQMESAELERTTVDIDAVAAGRALELRATGQVVK
FDGFLTLYREGRDDEEEDEENRRLPALTAGEGLLNKGIKTDQHFTEPPPRYSEASLVKRM
EELGIGRPSTYASVLAVLRDREYVRLEKRRLMPEDKGRLVTAFLESFFERYVEYDFTADL
EEKLDKISAGELEWKDVLRDFWLNFAAAVGETKDLRVSEVLSALDEMLTAHIFPPKEDGT
DPRLCPNCGNGRLSLKVGKFGAFIGCSNYPECKYTRPLAVQSGENGEAVDTGPRVIGTDP
DSGLEVTVRDGRFGAYLQLGEAKDGEKPKRSSLPKGLAPADVDLETALGLLSLPREIGTH
PDSGDPILAGIGRFGPYVQHGKTYANLDAEDDVLSIGINRAVALIADKQNKGPGRGRGAQ
GGRELGAHPTLGGPITVRPGRFGAYVNHGKVNATLPKSMVPEEVTLEQAVELITAKAGST
PAKPARRSASADGATKAKKPAAKKTTASKSAATKSTAKKPAAKKPAAKKAAAKAD
NT seq 2688 nt   +upstreamnt  +downstreamnt
atgcaggtcgtcatcgttgaatcgcctgcaaaggcgaagacgatcaacaaatatctgggt
ccaggctacgaggtcatcgcctcgtatggacatgtccgcgatcttccggccaaggatggc
tcggtggatcccgaacacgatttccacatgctgtgggatgtcgaccccaaatcccagaaa
cggctttccgacattgccaaggcggtgcgcggggctgacggcctgatcctcgccaccgat
ccggatcgcgagggcgaggccatttcctggcatgtgctcgaggtgctcaaggaaaagcgc
gccctcaaggaccagccggtgtcgcgcgtcgtcttcaacgccatcaccaagcaggccgtg
cttgaggcgatgaagaacccgcgcatgatcgacgcggccctcgtcgacgcctatctcgcc
cgccgcgccctcgactatctggtcggcttcacgctctcgccggtgctgtggcgcaaactg
cccggcgcgcggtcggcggggcgcgtgcagtccgtggcgctgcgtctggtctgcgaccgc
gagcgcgagatcgagaccttcatcacccgcgaatactggtcgatcgcggccaggctggcc
acgccgcgcggcgacgagttcgaggcgcgcctcgtcggggctgacggcaagaagatcacc
cgcctcgatgtcggcacgtccgaagaggcgatggcgttccggcaagcgctggagagctcc
gattacaaggtgcgctcggtcgaggcgaagccggcccgccggcacccctacccgcccttc
accacgtccacgctgcagcaggaagccagccgcaagctcggcttcgcgcccgccatcacc
atgcggatcgcccagcgcctgtatgagggcgtggacatcggcggcgagacggtcggcctc
atcacctatatgcgtaccgacggcgtcgacatggcgcccgaggcgatcgcctccgcccgc
tcggtgatcggccgcgactatggcgaccgctacgtgccgtccgtgccgcgcaaatacacc
gccaaggcgaagaacgcccaggaagcgcatgaggcggtacgccccaccgatctcggccgc
cgtccgaaggatgtgctgcgcctcctcgaaggcgaccaggccaagctctatgagctgatc
tggctgcgcaccatcgccagccagatggaatcggccgagctggagcgcaccacggtcgat
atcgacgccgtcgccgccggccgcgcgctggagcttcgcgccaccgggcaggtcgtgaag
ttcgacggcttcctcaccctctaccgcgaaggtcgcgacgacgaggaggaggacgaggag
aatcgccgcctgcccgcgctcaccgccggcgagggcctcctcaacaagggtatcaagacc
gaccagcacttcaccgagccaccgccgcgctattccgaggcgtcgctggtgaagcggatg
gaagagctgggcatcgggcgtccctcgacctacgcctctgtgctcgccgtgctgcgcgac
cgcgaatatgtgcggctggaaaagcgccggctgatgcccgaggacaagggccggctggtc
accgccttcctggagagcttcttcgagcgctatgtggagtacgacttcaccgccgacctt
gaggagaagctcgacaagatctcggcgggcgagctcgaatggaaggacgtgctgcgcgac
ttctggctcaacttcgccgccgccgtcggcgagacgaaggacctgcgcgtctccgaggtg
ctgtccgccctcgacgaaatgctcaccgcgcacatcttcccgcccaaggaagacggcacc
gacccgcgcctgtgccccaattgcggcaatggccggctgtcgctgaaggtgggcaagttc
ggcgccttcatcggctgctcgaactaccccgaatgcaagtacacccgtccgctcgccgtg
cagtccggcgagaatggcgaggcggtcgacaccggcccgcgtgtgatcggtaccgatccg
gactcaggtcttgaggtcaccgttcgcgacgggcgcttcggggcctatctccagcttggc
gaggccaaggacggcgagaagcccaaacgctccagccttcccaaggggctggcgcccgcc
gatgtcgatctggaaacggcgctcggcctgctgtcgctgccgcgcgagatcggcacgcat
cctgacagcggggacccgatcctcgccggcatcgggcgcttcggcccctatgtccagcac
ggcaagacctacgccaatctggacgcggaggatgacgtgctttccatcggcatcaaccgt
gccgtggcgctgatcgccgacaagcagaacaagggtccgggacgcgggcgcggcgcgcag
ggcggacgcgagctgggcgcccatcccacgctcggcggcccgatcacggttcgcccgggc
cgcttcggcgcctatgtgaaccacggcaaggtcaatgcgacgctgcccaagtccatggtg
cccgaagaggtgactctggagcaggcggttgagctgatcaccgccaaggccggttccacc
cccgcaaaacctgcccgccgcagcgccagcgcggacggcgcgaccaaggcgaagaagccc
gccgccaagaagaccactgcgagcaagagcgcggcgacgaaaagcaccgctaaaaaaccc
gcagccaagaagcctgccgcgaagaaggcggcggccaaggccgactga

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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