KEGG   Auxenochlorella protothecoides: F751_1253
Entry
F751_1253         CDS       T04132                                 
Name
(RefSeq) DNA repair helicase XPB2
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03022  Basal transcription factors
apro03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    F751_1253
  09124 Replication and repair
   03420 Nucleotide excision repair
    F751_1253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apro03021]
    F751_1253
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_1253
Enzymes [BR:apro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     F751_1253
Transcription machinery [BR:apro03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     F751_1253
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     F751_1253
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C SNF2-rel_dom DEAD
Other DBs
NCBI-GeneID: 23612644
NCBI-ProteinID: XP_011396850
UniProt: A0A087SE18
Position
Unknown
AA seq 785 aa
MMRSRTASEEVDWDLEEGYASDGQGYVLGAQDEKFANFSSLPMRPDHPNRPLWVCPDGRI
FLETFSRVYKQAYDFLIACAEPVSRPEFIHEYALTPHSLYAAVSIGLDTPTIVGVLGRLS
KCGLPAEVRAFIEASTENYGKVKLVLQRNAFFVESPYPAVLRRLLHDPVIRAARVLRAAD
DCFEVSAAVRDAAAATLAKTDVEAGGEEAEEGRGGGEAAGPDGASASARGPSQGEAPAAP
AGPAYLIDPVEIDPDRELHAFEIEAAQVEHVKQRCLPGGLNYPMLEEYDFRGDVANPTLS
MELRPHVSHRPYQEKSLAKMFGNGRARSGIIVLPCGAGKSLVGVSAAARMKKSCLVLCTN
AVSVDQWKYQFQMWTSLRDDQVCRFTSANHEWFAAAAGVCVTTYTMVAYSGRRSEESENV
MNEIMNREWGLIILDEVHVVPAQMFRKVIGIVKAHCKLGLTATLVREDHLITDLNFLIGP
KLYEANWLDLTRAGHIANVQCAEVWCPMTREFYREYLRPGTPVTQRQLLYVMNPSKLQAC
QFLVQYHERRGDKVIVFSDNIYALREYAVRMKRPFIYGATGHQERTRILHAFKHNPEVNT
VFLSKVGDNSLDIPEANVLVQISSHAGSRRQEAQRLGRILRKKKARLGVGEAEEFDAFFY
TLEVYFTSKRQQFLVDQGYSYKVIPSLLENAGGEEGLLLSSLDEQLDVLAAILAANETDI
GDENLAEVDGVPLRKSGAARRTAGNMAALSGAAGMRYMEFAAGAGRPRPALKQGQGRLAK
LRKKG
NT seq 2358 nt   +upstreamnt  +downstreamnt
atgatgcggagtcggacggcgtctgaggaggtggactgggacctggaggagggatatgcc
tccgacggccagggctatgtgctgggcgcccaggacgagaagtttgccaacttctcgtcc
ctgcccatgcgcccagaccacccgaataggccgctgtgggtgtgcccggacggcaggatc
ttcctggagaccttctcccgcgtctacaagcaggcctacgacttcctcatcgcctgcgcc
gagccggtctcccgccccgagttcatccacgagtatgcgctcacgccccactccctgtac
gccgcggtttccattggcctggacacgcccaccatcgtcggggtgctgggccggctgtcc
aagtgcgggctgccggcggaggttcgggccttcatcgaggccagcaccgagaactacggc
aaggtcaagctggtgctccagcgcaacgccttcttcgtggagtcgccctaccccgccgtc
ctgcgccgcctactgcacgaccccgtcatccgcgcggcgcgcgtcctgcgcgccgccgac
gattgcttcgaggtcagtgcggccgtgcgcgacgccgcggccgccaccctggccaagacg
gacgtggaggcggggggggaggaggctgaagaggggcgaggtggcggggaggcggctggc
cccgatggggccagtgcttcggctcgaggaccttcccaaggcgaggctcctgccgcgccg
gccggccccgcctacctgattgacccggtggagatcgaccccgaccgcgagttgcacgcc
tttgagatcgaggcagcccaggtggagcacgtgaagcagcggtgcctgcccggcgggctg
aactaccccatgctggaggagtacgacttccgcggcgacgtggccaaccccacgctgagc
atggagctgcggccccacgtatctcaccgcccctaccaggagaagtcgctggcaaagatg
tttggcaacggccgcgcccgctccggcatcatcgtgctgccctgcggcgcggggaagagc
ctggtgggcgtcagtgccgcggcgcgcatgaagaagtcctgcctcgtgctctgcaccaac
gccgtgtcggtggaccagtggaagtaccagttccagatgtggacctcgctgcgagacgac
caggtgtgccgcttcacgtcggccaaccacgagtggtttgccgcggccgcgggcgtctgt
gtgaccacctacaccatggtggcctactcggggaggcgcagcgaggagtccgagaacgtg
atgaacgagatcatgaaccgggagtgggggctcatcatcctggacgaggtgcacgttgtc
cccgcccagatgttccgcaaggtgatcggcatcgtcaaggcgcactgcaagctgggcctg
acggcgacgctggtgcgggaggaccacctcatcaccgatctcaacttcctcatcggtccc
aagctgtacgaggccaactggctggacctaacccgggcggggcacatcgccaacgtacag
tgcgcggaggtgtggtgccccatgacccgtgagttctaccgcgagtatctgcgcccgggc
acgcccgtcacccagcgccagctgctctacgtcatgaacccctccaagctccaggcctgc
cagttcctcgtccagtaccacgaacggcggggcgacaaggtcatcgtgttcagtgacaac
atctacgcgctgcgcgaatacgcggtgcgcatgaagcgccccttcatctacggcgccacg
gggcaccaggagcgcacccgcatcctgcacgccttcaagcacaacccggaggtgaacacc
gtcttcctgtccaaggtgggggacaactcgctggacatccccgaggccaacgtcctggtc
caaatctccagccacgcggggtccaggcgccaggaggcccagcgcctgggccgcatcctg
cgcaagaagaaggcgcggctgggggtgggggaggccgaggagtttgacgccttcttctac
accctcgaggtctactttaccagcaagcggcagcagttcctggtggaccagggctacagc
tacaaggtcatcccctccctcctggagaacgcaggtggtgaggaggggctgctgctcagc
tctctggacgagcagctggatgtgctggccgccatcctggctgccaacgagaccgacatc
ggcgacgagaacctggccgaggtggacggcgtgcctttgaggaaatccggggcggcgaga
agaacggctggcaacatggccgccctgtctggcgctgcgggtatgcgctacatggagttc
gcggcgggggccgggcgacccagaccggccctgaaacagggccagggtcggctggccaag
ctgcgcaagaaagggtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (21)   

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