KEGG   Auxenochlorella protothecoides: F751_3719
Entry
F751_3719         CDS       T04132                                 
Name
(RefSeq) DNA damage-binding protein 1a
  KO
K10610  DNA damage-binding protein 1
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03420  Nucleotide excision repair
apro04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    F751_3719
  09124 Replication and repair
   03420 Nucleotide excision repair
    F751_3719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:apro04121]
    F751_3719
   03400 DNA repair and recombination proteins [BR:apro03400]
    F751_3719
Ubiquitin system [BR:apro04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     F751_3719
DNA repair and recombination proteins [BR:apro03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      F751_3719
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      F751_3719
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 23615110
NCBI-ProteinID: XP_011402151
UniProt: A0A087STP8
Position
Unknown
AA seq 1092 aa
MSLPEDHRYNYVVTAQKPSSVRHSVVGCFTAPGAVNLIVSKCTRLEISVITADGLQGVMD
VPIYGRISALRLFAVAGEETERLFLLTEKNRFAILKCDPATGELQTCANGDASDRIGRPV
QSGQMCIVSPKRDAIVLHLYDGHLKIIPVSPSGVLSEAYNVRIDELNLVDLVFLDAEDFE
GLPTIAVLYDDGGGHRHAKTYSLSLPSRELLQFRWAQENLDAVANLLIPIPGTDGVVVVG
QSTVCFLAHNAVVSASIPSTIAYGAVDREGTRFLLGDFRGELLLLVLERNGPSKSVTGLH
IERLGRTSQPSTISYLDAGVVYIGSACGDSQLIRLHAHPPDPSQPDSFLEVLDTTTNLGP
IVDFCVVDLDRQGQGQVVTCSGGAGDGSLRIVRSGIGVLPQATVELPSLKGVWNLRRSFE
DEHDAFLVLGFVESTSVLGMNAAEEIEETLWSSNLLGSLVVQVTPAAVNVADTQTLQRVS
QWTPPEGSHIIMAAANATQMAVVTGVGRVVLLELKGSALEEAGQLALDSEIACIDLSPLK
AGATASDWLVLGTWSMHVLLYSLPGLQLATDEALGGEVIPRSILLSQFEDSAYVFCGLGD
GHLVNYRLHGDQLGQRKKLALGTKPMKLRALRSRGVHYVFCASDRPTIIYANNQKLVYSN
LNESEVNFMVSFHTEAIPHSLALAKDNDLTIGIIDEIQKLHIQTVPLEEQPRRIAHQPAT
RTYGVITTQATMGMVDAKSDSLRLIDDQTFETLDRYQMPESDMACSLLSTTLGETGAGPY
YIVGTATTNLAEREPTEGRIMVFEAVEGKLHLVYTHETRGAVYVLHPFLHNDETMLVAGI
NSRVQMYRWEVSAMSTASLMPHCSYDGNVLILFLDSRKDLVILGDLMKSMQVLQYSSEEG
KLLLRARDFRPMWMTAVKAMDDDTYIGGENSCNIFVVHKGDDAAPDEERTRLEVIGQYHV
GEFINRFQKGSLVMKLPDSELSQAPLMLFGTINGVIGLIASLSQDQFQFLERLQAAMLKV
VKGVGGLDHGAWRSFVNTHTQPTPACGFVDGDLVEQFLDLSRGDQEIVCSHLGGSASLEQ
VQHLVEDLSRLH
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgtcccttccagaagatcatcgatacaattatgtggtcacagcacagaaaccaagcagc
gttcgtcactccgtggttgggtgttttactgcaccgggggctgtgaacctgatcgtctcg
aagtgcacgagactggagatcagtgtgatcacagcagatggactgcagggcgtcatggat
gtccccatctacgggcgcatctcagcgctgcgcctctttgctgtggcgggtgaggagacg
gagcgcctcttcctcctcacagagaagaatcgctttgcgatcctgaagtgtgaccccgcc
acaggcgagctgcagacctgcgccaatggcgacgcctcggaccgcatcggtcgcccggtc
cagtcgggacagatgtgcatcgtcagccccaagcgggacgccattgtcctgcacctgtat
gatggtcacctcaagatcatcccggtgagccccagcggggtcctttccgaggcttacaat
gtcaggatcgacgagctgaacctggttgaccttgtgttcctggacgcagaggacttcgag
ggtctgcccaccatcgcggtgttgtatgacgatggaggaggccaccgccatgccaagacg
tactccctctccctccccagcagggaactgctgcagttccgctgggcgcaggagaacctg
gatgccgtggcgaacctgctcatccccatccccggcaccgacggcgtcgtggtggtcggc
cagagcaccgtctgcttcctggcgcacaacgcggtggtgtcagcctccattccctccacc
atcgcttatggtgccgtcgaccgagaagggaccaggttcctgctgggcgacttcaggggc
gagctgctgctcctggtcctggagcggaatgggccgtccaagagcgtcactggactccac
attgagcggctcggccgcacctcccagcccagcaccatctcctacctggatgccggcgtc
gtgtacatcggcagcgcatgcggcgactcccagctcatccggttgcatgcccacccgcca
gaccccagccagccggacagcttcctggaggttctggacaccaccaccaacctgggcccc
atcgttgacttctgcgtggtggaccttgaccgccagggccaggggcaggtggtcacctgt
tccggcggcgcgggggatgggtcgctgcgcattgtgcgcagtggcatcggggtgctgccc
caggccaccgtggagttgccgtccctcaagggcgtctggaacctgcgcaggagctttgag
gatgagcacgatgcgttcctggtgctgggatttgtggaaagcacgagcgtgctgggaatg
aatgcagccgaggagattgaggagacgctgtggtccagcaacctgctcggcagcctggtg
gtccaggtgacgcccgctgctgtgaatgtggcagacacccagacgctgcagcgtgtcagt
cagtggaccccgcctgagggcagccacatcatcatggccgctgctaatgcaacccagatg
gctgtggtgacgggggttggcagagtggtgttgctggagctcaagggctctgccttggag
gaggcaggccagctggcactggactctgagattgcctgcatcgacctctctcccctcaaa
gccggggccacggcgtcggactggctggtcctcggtacgtggagcatgcatgtgctcctg
tactcgctcccggggctgcagctcgcgacggacgaggccttgggaggggaggtcattcca
aggagcatcctgctgtctcagtttgaggactctgcatatgtgttctgcggcctgggcgac
ggccacctggtcaactaccggctgcacggcgaccagctcggccagagaaagaagctggca
ctgggaaccaagcccatgaagctacgcgctctgaggtcacgaggcgtgcactacgttttc
tgtgcatccgaccgcccgaccatcatctatgccaacaatcagaagctcgtctactccaat
ctcaacgagagcgaggtgaacttcatggtgtcattccataccgaagccatcccacactcg
cttgctctggccaaggacaacgatctcaccattggcatcatcgatgagatccagaagctg
cacatccagacggtgcccctggaggagcagccccggcgcatcgcgcaccaaccggcgacg
cgcacgtatggtgtgatcaccacccaagccaccatgggcatggtcgacgccaagagcgat
tcgctgcgcctgattgatgaccagacatttgagaccctggaccggtaccagatgcccgag
tccgacatggcatgcagcctgctctccacgaccctgggcgagacaggtgcaggcccctac
tacatcgtgggcaccgccacgaccaaccttgcagagcgggaaccgaccgagggacggatc
atggtctttgaagcagtcgaagggaagctgcacctggtgtacacccatgaaacgagaggt
gctgtgtacgtcctccaccccttcctccacaacgacgagacgatgctcgtcgcaggaatt
aacagcagggtgcagatgtacagatgggaggtttcggccatgagcaccgccagcctcatg
ccccattgcagctatgatggcaacgtgctgatcctgttcctggactccaggaaggatctt
gtcatcctcggtgacctgatgaagtcgatgcaggtgctgcagtacagtagcgaggagggg
aagctgttgctgcgtgcgcgagactttagacccatgtggatgacggcagtgaaggccatg
gatgatgacacgtacattggcggcgagaactcctgcaacatattcgttgtgcacaagggt
gacgacgctgcacctgatgaggagcgaacgaggcttgaggttattggccagtaccacgtt
ggcgaattcatcaatcgcttccagaaaggatcactggtgatgaaactacccgattcagaa
ctctcgcaagccccgctcatgctatttggaacaatcaatggagtcattggcctcattgca
tcgctctcacaagaccaattccagttcttggagcggcttcaggctgcaatgctcaaggtc
gtgaaaggagtcggagggttggaccatggagcatggcgctcattcgtcaacacgcacacc
cagcccacacccgcctgtggttttgtcgacggcgatttggttgagcagttcctggatcta
agtcgcggggatcaggagatcgtatgcagtcatcttggaggatctgcatcgctcgagcag
gtccagcaccttgtcgaggacctgtccagattgcactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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