KEGG   Auxenochlorella protothecoides: F751_4561
Entry
F751_4561         CDS       T04132                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit rpa1
Organism
apro  Auxenochlorella protothecoides
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4
Other DBs
NCBI-GeneID: 23615952
NCBI-ProteinID: XP_011400258
UniProt: A0A087SNI7
Position
Unknown
AA seq 1693 aa
MNSSLHTKEVTTAKVRSVGFGFFSDDEIRKVSVKKIISPIIFDNSKTPVEGGLYDTALGP
LDPRERCTTCGLTADCPGHFGHVELAVPVYNPLVFGTLYKLLRCACLHCFKMRMASKEVQ
RYVARLSLLLEGRLAEAQGINVGASSSARKAAGKEGMELDEGSGGEGSPTSVVKGPLPSR
RTVAMTGQSLEAAIDTMSEIFKKQPPGRCANCGAHSPSIKKEGYSKLFLLPLTTKKAAAN
KMQGTEILPSLSRLQAGNLTLDEAAGLGSQGCEEEAKVRYGFLKEEKEGLSDEEVMAEFK
ESKHGDEGGVFAAELPRAEVPRQLKGVPASEKENASNVSVGPPKFLTAAEVQEILRCVWV
ANADIMQLIYPADVAQRKRRQGASEAQAAAAGKAAAQAGNYREFFIQTVAVTPNRFRPIS
HVGEMVYEHPQNTMLVKVLNANLEIQRLAAETDQDGEPLDITDGRMLRTWLEMQNSVNAF
IDSTTAENEPNAIVRGIRQQLEKKEGLFRKNMMGKRVNFAARSVISPDVYLNGGEIGVPP
YIAARLTFPERVTPWNVERLCEAVMAGPGRNPGAVAVENEKGRLLMLRDDAKVVYRSMED
GDVLLTNRQPTLHKPGMMAHRARIMRDERTIRFHYANCATFNADFDGDEINLHLPQDQLG
RAEGYGIVSADHQFFVPTDGKPLRGLIQDHIVAGTLLTLRDRFFTAAQYHQLVYEAVCTD
CSGAWEVWLDEPALVKPVRRWTGKQVLTAVLMHYTRDQLPFSMSTASRVPVEAWGKNSGE
GKLLIQHNHVLAGCVDKNCFGKHGLLHFFHELYGAERTSLLTASLSRLLTGFLQKHGFTC
GMSDVLLVQDAEEERKKLLTSADVRCLDAAASLFGPSRAGPLAEQGMSYEEAFRSAEPDV
REQLRDRFRSNQETGALLDMKSSSAMHPLSSDVVRACLPGGQEKAFRHNMMALMTVTGAK
GSLVNFSQISCLLGQQELEGRRVPRMASGKTLPCFAPFDVGARSGGYVGDRFLSGLRPQE
YYFHCMAGREGLVDTTVKTSRSGYIQRCLVKNLEPLRVAYDSTVRDDTDSSIVQFHYGED
GIDTTRTGCLRTLPFFYGNMPQLGKILGAATALSGPGLVGNPSKEQGEATGVVRSWSKAL
LAGKSKTMAKCLPADSVVSHDTLGVTSEGFQGALAEAMYGGGLRPPVGPEPLGKDYKRAG
KKEARCLSKNKPWSFTPLDPMDFTRLMQLRFQQCQAAPGEAVGVLAAQSVGEPSTQMTLN
TFHMAGRGEANVTLGIPRLREILMTASPTLATPVEEDALARSSAVDGGRARVARVTLRFH
PPHAYPPELGLGFEELAAAFRDVFVPRFQAAVKAEIRRASTGNALGPVAEAEEPESEEDE
EGKTRFGAGRGEHATYDAGDEDDAALAAQAQRQAAEREGLAEEEEGGEETGPGADEESRG
ATASADAEAEEGWAAAPSPAVPRSAASASGAARRTSASASSRVELEGGVWVDAATSSCGL
ALHLALDCPKLLLQEVAERVAAAAVLRGTPGVSRCYVLEAARGAAACVQTDGINLRAAAA
SADLVDVDGLAANSPYAMLETYGVEAARATIVREAASVFGAYGIGVDPRHLALIADYMTH
LGGYRACNRLGISASTSPFLKVTFETAASFLVSSTLHGDVDRLTSPASRIVLGQPVAMGT
GAMDLVQHLDAAR
NT seq 5082 nt   +upstreamnt  +downstreamnt
atgaactcgagcttgcacaccaaggaggtcaccaccgccaaagtgcggtcggtaggcttc
ggtttcttcagtgacgatgagataagaaaggtcagcgtgaagaagatcatctcgcccatc
atattcgacaacagcaagacacctgtggagggtggcctgtatgacactgccctgggtccc
ttggaccctcgagagaggtgcacaacatgcggcttgaccgcggattgcccgggccacttt
ggtcatgtagaactggcggtgccagtgtacaacccccttgtctttgggaccctgtacaag
ctgctgaggtgcgcctgcctgcactgctttaagatgcggatggccagcaaggaggtgcag
cgatatgttgctcgtctcagcctcctgctggagggccggttggccgaggcccagggcatc
aacgtgggcgcgtccagctcagcgaggaaggcagctggaaaggagggcatggagctggac
gaagggtccggaggggagggctccccaacctccgtcgttaagggcccgctgcccagccgc
cgcacggtggcaatgactgggcagagtctggaggcggctatcgacaccatgtccgagatc
ttcaagaagcagcccccaggacgatgtgccaactgcggcgcccacagccccagcatcaag
aaggagggctacagcaagctgttcctgctccccctgacgaccaagaaggcggcggccaac
aagatgcagggcacggagatcctgccctccctgagccggctgcaggccgggaatctgacg
ctggacgaggcggccgggctcggcagccagggttgtgaggaggaggccaaggtgcggtac
ggattcctgaaggaggagaaggagggcctgagcgacgaggaggtcatggccgagttcaag
gagtccaagcacggcgacgagggcggcgtgtttgccgctgaactgccccgcgctgaggtc
ccccgtcagctcaagggggtcccagcctctgaaaaggagaatgcctccaacgtcagcgtc
ggcccgcccaaattcctgacggcggcggaggtccaggagatcctccgttgtgtatgggtg
gccaatgccgacattatgcagctcatctacccagcagacgtggctcagcggaagaggcgt
cagggggcctcagaggctcaggctgctgcggctggcaaggctgctgcacaggctggcaac
taccgcgagttcttcatccagacggtggccgtgacacccaacaggttcagacccatcagc
catgttggagagatggtgtacgagcacccccagaacacgatgctggtcaaggttctgaat
gccaacctggagatccagcgccttgccgccgagacggaccaggatggggagcccctggac
atcaccgacggccgcatgctgcgcacctggctggagatgcagaactcggtcaacgccttc
atcgactccaccaccgccgagaacgagccaaacgcgatcgtacgtggcatccgccagcag
ctggagaagaaggagggcctgttccgcaagaacatgatgggcaagcgcgtcaactttgca
gcgcgctccgtcatctccccagatgtttatctgaacggtggggagatcggggtgcccccc
tacatcgcagcccgcctgaccttccccgagcgcgtcacgccctggaatgtggagcgactg
tgcgaggctgtgatggcgggccccgggcgcaacccgggcgcggtggcggtggagaacgag
aagggccgcctgctcatgctgcgagacgacgccaaggtggtctaccgctccatggaggac
ggcgacgtgctgctgactaaccgtcagccaaccctgcacaagcctggcatgatggcgcac
cgggcacgcatcatgagggacgagcgcacaatccgcttccactacgccaactgcgcgacc
ttcaacgccgactttgacggcgacgagatcaacctgcacctgccccaggaccagctgggt
cgggcggaagggtatggcatcgtctccgccgaccaccagttcttcgtgcccaccgatggc
aagcctctgcgcggcctcatccaggaccacatcgtggccggcacgctgctcacgctgcgc
gaccgtttcttcaccgccgcgcagtaccaccagctggtgtacgaggcggtgtgcaccgac
tgcagcggggcctgggaggtgtggctggacgagcccgccctggtgaagccggtgcggcgc
tggacggggaagcaggtgctgaccgcggtgctcatgcactacacgcgcgaccagctgccc
ttctccatgagcaccgcctcgcgcgtcccggtggaggcgtggggcaagaactcgggcgaa
ggcaagctgctcatccagcacaaccacgtgctggcggggtgcgtggacaagaactgcttt
ggaaagcacggcctcctccacttcttccacgagctgtacggcgccgagcgcacctcgctg
ctcacggcctccctgtcgcgcctgctgaccggcttcctccagaagcacggcttcacgtgc
ggcatgtcggacgtgctgctggtgcaggacgctgaggaggaaaggaagaaattgctgacg
agcgctgacgtgcggtgtctggatgccgccgccagcctgtttgggccctcccgggcagga
cccctggccgagcagggcatgtcctatgaggaggccttccgcagcgcggagccagatgtg
agggagcagctgcgcgacaggttccgctccaaccaggagactggtgccctgctggacatg
aagtcctccagcgcgatgcacccgctatccagcgacgtggtccgggcgtgcctgcccggc
ggccaggaaaaggccttccggcacaacatgatggcgctgatgacggtgacaggggccaaa
ggctccctggtcaacttctcccagatctcctgcctgctgggccagcaggaactggagggg
cggcgagtgccacgcatggcctcgggcaagacgctgccctgcttcgcgccatttgacgtc
ggcgcgcgctccggcggctacgtgggcgaccgcttcctgtcgggtctgcgcccgcaggag
tactacttccactgcatggcagggcgggaggggctggtggacaccacggtgaagacctcc
cgctcgggctacatccagcgctgcctggtgaagaacctggagccgctgcgtgtggcctac
gactccaccgtccgcgacgacaccgactcctccatcgtccagttccactacggcgaggac
ggcatcgacaccacgcggacggggtgcctgcgcacgctgcccttcttctacggcaacatg
ccgcagctgggcaagatcctgggcgccgccacggccctgagcgggccggggctggtgggc
aacccctccaaggagcaaggagaggcgacgggcgtggtcaggtcgtggagcaaggcgttg
ctggcgggcaagtccaagacgatggcaaagtgcctgcctgcggactcggtggtctcccac
gacaccctgggcgtcacctccgaggggttccagggggcccttgccgaggccatgtacggc
ggcggcctgcgtccgcccgtcggccctgagcccctgggcaaggactacaagcgcgcgggg
aagaaggaggcgcgctgcctgtccaagaacaagccatggagcttcacgcccctggacccc
atggacttcacgcggctgatgcagctgcgcttccagcagtgccaggccgcccccggcgag
gcggtgggtgtgctggccgcgcagtcggtgggcgagccctccacccagatgacgctcaac
actttccacatggcggggcggggcgaggccaatgtgaccctgggcatcccgcgcctgcgc
gagatcctgatgaccgcctcgcccaccctggccacgccggtggaggaggacgcgctggcg
cgcagcagcgcggtggacggcgggcgcgcgcgcgtggcgcgcgtgacgctgcgcttccac
cccccccacgcctacccgcccgagctgggcctgggcttcgaggagctggccgccgccttc
cgcgacgtcttcgtcccgcgcttccaggccgcggtcaaggcggagatccgccgcgccagc
acgggcaacgcgctggggcccgtagccgaggccgaggagccggagagcgaagaggacgag
gaggggaagacgcggttcggcgcggggcgcggcgagcacgccacctacgacgccggggac
gaggacgacgcggccctggccgcgcaggcgcagcgccaggccgctgagcgcgagggcctg
gcggaggaggaggagggaggggaggagacggggccgggtgcggatgaagaatcgcggggc
gccactgcctcggcggatgcagaggcggaggagggctgggcggccgcccccagccccgcc
gttccgcgctccgccgcatccgcatcaggcgccgcccgccgcacctccgcctccgcctcg
tcgcgcgtcgagctggagggcggggtgtgggtggatgcggcgacctcctcctgcggactg
gccctgcacctggccctggactgccccaagctgctgctgcaggaggtggcggagcgcgtg
gctgcggccgccgtcctgcgcggcacgcccggcgtgtcacgctgctacgtgctggaggcg
gcgcgcggcgcagccgcctgcgtgcagaccgacggcatcaacctgcgggccgccgccgcc
tcggccgacctggtggacgtggacggcctggccgccaactcgccctacgccatgctggag
acgtacggcgtggaggccgcgcgcgccaccatcgtgcgtgaggccgcctcggtcttcggc
gcctacggcatcggcgttgacccgcgccacctggccctcatcgccgactacatgacgcac
ctgggagggtaccgggcctgcaaccggcttggcatctccgctagcacctccccctttctg
aaggtcacgttcgagacggcggcctccttcctggtctcctccaccctgcacggcgacgtg
gaccgcctcacctcccccgcctcccgcatcgtgctgggccagcccgtggccatgggcacg
ggggccatggacctggtgcagcacctggacgcggcgcgctga

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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