KEGG   Acetobacter pasteurianus IFO 3283-01: APA01_17220
Entry
APA01_17220       CDS       T00988                                 
Name
(GenBank) ribosomal RNA large subunit 23S rRNA pseudouridine synthase C
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
apt  Acetobacter pasteurianus IFO 3283-01
Brite
KEGG Orthology (KO) [BR:apt00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:apt03009]
    APA01_17220
Enzymes [BR:apt01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     APA01_17220
Ribosome biogenesis [BR:apt03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    APA01_17220
SSDB
Motif
Pfam: PseudoU_synth_2 S4
Other DBs
NCBI-ProteinID: BAH99850
UniProt: C7JBV6
Position
complement(1861198..1862184)
AA seq 328 aa
MSVVNRTVSEDEAGIRLDRYFRRHYPHLTQGALQKLCRTGQIRVEGKRVEASTRLEPGQT
VRVPPIPMAAKPARDVPRPLDEKLAREIRKMVVYQDKHVIALNKPAGLAVQGGPGITKHV
DMMLDGLREEDDPRPRLVHRIDKDTSGLLLLARTPGVAAKLAASFRGRDVKKIYWAVVVG
RPDPLSGEIDQPLARLGAGPGSITVAADRKDADAQSARSVYEVLDSAARKFSWLELSPLT
GRTHQLRVHCESLGTPILGDPKYGGAAAHPSGFTDRLHLHARMLDMPHPAGGRLTVSAEL
PPHMRETFRTLGFVPGTTPPPSRRGGQG
NT seq 987 nt   +upstreamnt  +downstreamnt
atgagtgttgtcaatcgtaccgtaagcgaagacgaagctggtattcgtctggatcgctat
tttcgccgccattacccgcatcttacgcagggggcgcttcaaaaactgtgccgcacgggc
cagattcgtgttgagggcaaaagggtagaagcctccacccggctagagccggggcaaacg
gtgcgcgtgccgcccatacccatggctgccaaacccgcgcgcgatgtgccgcgcccgctg
gatgaaaaactggcgcgcgaaatccgcaagatggtggtgtatcaggacaagcacgtgatt
gcccttaacaagcccgcagggcttgccgtgcagggtggccccggcattaccaagcatgtt
gacatgatgctggatggcttgcgggaagaagatgatccgcgcccacggctggtgcaccgg
attgataaagatacctccggtcttctgctgttggcgcgcacccccggtgtggccgccaag
ctggcggcatctttccgtggccgggatgtaaaaaaaatctactgggcagttgtggtcggg
cggcctgatccactttcgggcgagatagatcagccgttggcccgtttgggtgctggcccc
ggttccattaccgtggcggcggaccgtaaggatgccgatgcgcaatctgcacggtctgtt
tatgaagtgctggattcggctgcgcgcaagttttcttggctggagctttcaccgcttact
gggcgcacgcatcagctccgtgtgcattgcgaatctttaggcacacctattttgggtgat
cccaaatacggtggagcggcagcccatccttctggctttacagacaggttgcatctgcat
gcccgtatgctggatatgccgcacccagcaggtgggcgtttaactgtaagtgccgaattg
ccgcctcatatgcgtgaaaccttccgaactcttgggtttgtgccgggcaccacaccgcca
ccttcacgccgtggtggccaaggataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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