KEGG   Lancefieldella parvula: Apar_0807
Entry
Apar_0807         CDS       T00983                                 
Name
(GenBank) hypothetical protein
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
apv  Lancefieldella parvula
Pathway
apv03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:apv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Apar_0807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:apv03021]
    Apar_0807
   03400 DNA repair and recombination proteins [BR:apv03400]
    Apar_0807
Enzymes [BR:apv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     Apar_0807
Transcription machinery [BR:apv03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     Apar_0807
DNA repair and recombination proteins [BR:apv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      Apar_0807
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: ACV51236
UniProt: C8W6Z6
Position
complement(890435..890719)
AA seq 94 aa
MSVIKPEIDSLLQKTEQNPFLLCSLASKRACDINNMLHGQHLRVTAVQDFDDITTVASGK
DSVSIAMKEINDGTLGFVKDSFDEAIKGENTIVY
NT seq 285 nt   +upstreamnt  +downstreamnt
atgtctgttattaagcctgaaattgacagcctgcttcagaagactgagcagaatccattt
ttactttgctctcttgcttctaagcgtgcttgcgatataaataatatgcttcacggtcag
cacttgcgtgtaactgctgttcaggactttgatgacattactactgttgcaagtggtaaa
gattctgtctctattgctatgaaagaaatcaacgatggtacccttggctttgttaaagat
tcttttgatgaggcaattaagggcgagaacactatcgtttattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (18)   

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