KEGG   Aquiluna borgnonia: HRU87_04135
Entry
HRU87_04135       CDS       T06624                                 
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
aqg  Aquiluna borgnonia
Pathway
aqg03030  DNA replication
aqg03430  Mismatch repair
aqg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aqg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HRU87_04135 (dnaE)
   03430 Mismatch repair
    HRU87_04135 (dnaE)
   03440 Homologous recombination
    HRU87_04135 (dnaE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aqg03032]
    HRU87_04135 (dnaE)
   03400 DNA repair and recombination proteins [BR:aqg03400]
    HRU87_04135 (dnaE)
Enzymes [BR:aqg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HRU87_04135 (dnaE)
DNA replication proteins [BR:aqg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     HRU87_04135 (dnaE)
DNA repair and recombination proteins [BR:aqg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     HRU87_04135 (dnaE)
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon DUF655
Other DBs
NCBI-ProteinID: QKJ25375
UniProt: A0A7D4TUA5
Position
complement(799431..802922)
AA seq 1163 aa
MSDSFVHLHNHTEYSMLDGAARIKQLIAKAVSLGMPAIAMTDHGNTHGAYEFWKQATSQG
IKPIIGIEAYLAPGSRREKTKVRWGDGGDDDVSGGGAYSHMTMWSTDNASMQNLFRLSSE
AYLSGYYFKPRMDRELLAKYGKGLIATTGCPGGEVQTRLRLGQYKEAVETAAEFRDLFGE
GNFFVELMDHSLAIEKRVRDDLLKLARELNLPLVATNDLHYTEQADAVAHDALLCVQVGS
NLYDPNRFKFESQEYYLKSAEQMREIFKEVPEAASNTLLIAERCQVDFEKRDLMPRFPVP
EGETESGWFEKEVWRGMQRRFPNGFSEKHREQAKYEIEVIDKMGFPGYFLVVADFIGWAR
DQGIRVGPGRGSAAGSLVSYAMGITELDPLEHDLIFERFLNPERLSMPDIDVDFDDRRRP
EVIRYVTEKYGDDRVAQIVTFGTIKAKQALKDAARVLAMPYSVGEKLTKAMPPMVLGRDV
SLNELIDPSAERYSEAAEFREILATDEESQKVFDLAQGLESLKRQWGVHAAGVIMSAEPL
MDVIPIMKREEDGAIITQFDQPPCESLGLLKMDFLGLRNLTVLDDALENIRSNRSENVVL
ETLDLNADEKTFELLSRGDTLGVFQLDGDAMRQLLRLLKPTEFEHISAVIALYRPGPMGM
NSHINYAQRKNGLQQSEGVHPELTEPLSEILDPTYGLIVYQEQVMAAAQKVAGYTLGQAD
LLRRAMGKKKPEELEKQFEIFSSGMKAGGFSESAITALWDTLLPFADYAFNKAHSAGYGV
LSYWTAYLKANYPAEYMAALLTSVGDSKDKLAVYLNECRRMGIRVLPPDVNQSIGVFAAV
GDDIRFGLEAVRNVGRNVVDSIVEARRGAKFESFQDYLTRVPAHAATKRVVESLIKAGAF
DSLGHTRRALIAIHEEAIDSSAVLKRQALSGQVDLFGGFFDEDPAMIPIPNLPEWTKRDL
LAHEREMLGLYVSDHPLAGQEALLLRHSDMGTIALKESAIKDGETVTIAGLITQVQHKVA
RTSGNPYGQVVVEDFSGEISIMFMGKTYLENKELLRADQTVSVRGRVSRRDEEIMLQAFS
IEVLEAGREQGGVVVIQVREALATKTRLQQLTEILGRHPGPVEVQIRLQNGGESKHFLLP
QRVAVGHDLFGEIKALMGQDSVS
NT seq 3492 nt   +upstreamnt  +downstreamnt
atgagcgattcgttcgtccacctgcacaatcacaccgaatactccatgctcgatggggca
gctcgaatcaagcagctgattgccaaggcagtgagccttggaatgcctgcgatcgcgatg
actgaccacgggaacacccatggcgcctacgagttctggaagcaggcaaccagccaggga
atcaagccaatcattggcattgaggcatacctagcacctggttcacgcagggagaaaacc
aaggtgcgctggggagatggcggagacgacgacgtctccggtggcggcgcctacagccac
atgaccatgtggtcgaccgataacgcttcaatgcagaacttatttcggctctcctccgaa
gcctatttgtccggctactacttcaagccgcgcatggatcgtgaactgctggcgaagtac
ggcaaaggcttgattgccaccaccggttgtccaggtggcgaggtgcagacgagattgcgg
cttggtcagtacaaggaggcggtggaaaccgcagctgaatttagagacctattcggagag
ggaaacttctttgtggagctcatggatcactctctggccattgagaaacgggttcgggat
gatctgctgaaactcgctagagagctgaatcttccgctggttgcaacaaatgacctgcac
tacaccgagcaagcggatgcggttgctcacgacgctctgctgtgtgtccaggttggctcg
aatctgtacgacccaaaccgtttcaagtttgagtcgcaggagtactacctaaagtccgcc
gagcaaatgcgggaaattttcaaagaggtgccagaggctgcgagcaacacgctcttgatt
gcggagcgctgccaggttgacttcgaaaaacgcgacctcatgccgcgctttccagtccca
gagggggagacggagagtggctggtttgaaaaggaggtttggcggggaatgcagcgccgt
ttcccaaatggcttctcggaaaagcatcgtgagcaggcgaagtacgaaattgaagtgatc
gacaagatgggattccccggctacttcctggtggttgcggactttatcggttgggcgagg
gatcagggcatcagggtcggtccgggccgaggatcagcagctggatccctggtttcctac
gccatgggcatcacagagcttgatcctcttgagcacgaccttattttcgagcggtttttg
aacccagagcgactttcgatgcctgatatcgatgttgactttgacgaccgcaggcgcccc
gaagtcattcgctacgtcacggaaaagtatggtgatgaccgagtggcgcaaatcgtcacg
tttggaaccatcaaggcgaagcaggccctcaaggatgccgcccgagtcctcgcaatgccc
tactcggttggtgagaagctgaccaaggcaatgcccccgatggttttgggtcgcgacgtt
tcgctcaatgaactaatagatccatcagcagagcgctattccgaggctgccgagtttcgt
gaaattttggccaccgatgaggaaagccagaaggtattcgatctagcccagggcctggag
tcgctgaagcgccagtggggcgttcatgccgccggtgtgatcatgtccgccgagccactg
atggatgtcatcccaatcatgaagcgcgaagaggatggcgcaataattacccagtttgac
cagccaccctgtgaatcactgggccttttgaagatggactttctgggcctgagaaacctc
acggttctcgacgatgccctggaaaacattcggagcaaccgttcggaaaacgtagtcctg
gagaccctggatctaaacgccgatgagaagaccttcgagctgctttcaaggggcgacacc
ttaggtgtgtttcagcttgatggcgatgctatgcgccaactgcttaggctcctaaagcca
acagagtttgagcacatctcggccgttattgccctttatagacccggccccatgggaatg
aactcccacatcaactatgcccagcgcaaaaatggcctccagcaatccgaaggtgttcac
cctgagctgacggaaccgctgagtgaaattttggatcccacctacggcctgattgtttat
caggagcaggtcatggcagcagctcaaaaggtcgctggctacacactcggtcaagcggac
ctgctccgaagagcgatgggtaagaaaaagccggaagaactggagaagcagttcgagatt
ttcagttcggggatgaaggccggtggatttagcgaatccgctattaccgccctatgggac
actctgcttccttttgctgattatgccttcaacaaggcgcactcggcaggttacggagtc
ttgagctactggaccgcctacctgaaggccaactaccctgccgagtacatggctgcgctg
cttacatcggtcggggatagcaaagacaagcttgcggtttacctcaatgagtgcagacgc
atgggtattcgagtcctgccgccagatgtgaaccagtccatcggcgtctttgccgcggtc
ggcgatgatatccgctttggtttggaggcagttcgcaacgttggccgcaacgtggtcgat
tccatcgttgaggctcgcaggggcgccaagtttgaatctttccaggattacctaactcgg
gttccagctcacgccgcgaccaagcgggtggtcgaatcgctaattaaagcgggggccttt
gattcgcttggacacaccaggcgcgctctgatagccattcacgaggaggccatcgattct
tctgcggttctgaagcgtcaagcactcagtggccaggtggacctgtttggcggattcttc
gatgaggatccggccatgattccgattccaaatctccccgagtggaccaagcgagattta
ctggcccacgagcgcgaaatgcttgggctgtatgtttctgatcacccgctggccgggcag
gaggcgctgcttcttcggcattcggacatgggaactatcgcactcaaagaaagtgccata
aaggacggcgaaaccgtcacgatcgcagggcttatcactcaggtgcagcacaaggtagcc
cgcaccagtggcaatccctatggccaagtggtcgtagaggacttttccggcgagatttcc
atcatgttcatgggcaagacctacctggaaaacaaggagctcttgagggctgaccaaacg
gtttcggtgcgcggtcgtgtttcgcgccgcgatgaagagattatgcttcaggccttttcc
atcgaggtgctcgaggccggccgagagcagggtggtgttgtcgtgatccaggtcagagag
gctctcgccaccaaaaccagacttcagcagctaacagagattctcgggagacacccaggt
ccggttgaggttcaaattcggctccaaaacggtggcgaatcaaaacatttcttgctgccc
cagcgcgttgcggtcggtcacgacctgttcggcgaaattaaggccctcatgggccaagat
tcggtcagctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (18)   

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