KEGG   Aquitalea sp. USM4: DKK66_06770
Entry
DKK66_06770       CDS       T05865                                 
Name
(GenBank) ribonuclease II
  KO
K01147  exoribonuclease II [EC:3.1.13.1]
Organism
aqs  Aquitalea sp. USM4
Brite
KEGG Orthology (KO) [BR:aqs00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:aqs03016]
    DKK66_06770
Enzymes [BR:aqs01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     DKK66_06770
Transfer RNA biogenesis [BR:aqs03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    DKK66_06770
SSDB
Motif
Pfam: RNB
Other DBs
NCBI-ProteinID: QBJ77826
UniProt: A0A4P6TJN4
Position
complement(1408240..1410114)
AA seq 624 aa
MNVFYEESGSFKVGTIVSRADASLQVDTLHGKRAKIKSSNVFLEFSSTLADFLPAAEKMA
DEIDLDFLWECSPEDEFEHDVLAADYWGHAPSALENAAIILRVFGAPMYFYKKGKGRYKK
APEEALKAALAGIERKKREQEQIDGWVAELKAGTLPEAIRSQLMTLLWKPDKNTLEFKAF
DQAARELNQPPLKLAQSVGGISSVPDYLMAGFLMEYFPKGSGFGKYAPPLLPEELPLSEV
AAFSIDDANTTEIDDALSVVDLPDGNKRVGIHIAAPTLGVPVDSDIEKLVWGRLSTVYFP
GGKITMLPDDVVQAFTLQEGQDCPALSLYVDVTPDFEPVAYESRIERVRIAANLRHAELE
QQFNEDTLLNDPGVDYPFKRELTWLWHFANALEKRRGKYDPTRPVQMDYNFDVVDGKVLI
TLRKRGAPMDKLVSELMILANSEWGRMLAEADIPAMYRAQSMGKVRMTTRPEPHIGLGVA
QYAWATSPLRRATDFVNQRQLTAMIRGEKPQFEQGNAMLFALLRDFDTTYSAYLGFQDKL
EHFWCLRWFTQEGVSNVTATFIKEDLVRIDGLPLRVRIPGLPELARGDRIQLSVIRIDEL
MAEIEFRFVGVVGHVEAASEEEEG
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgaacgtattttacgaagaaagcggttccttcaaggttggcaccattgtttcccgtgcc
gatgccagcttgcaggtagatacgctgcatggcaagcgagccaagatcaaatcaagcaat
gtttttctcgagtttagctcgactctggcagattttcttcctgctgcagaaaaaatggct
gatgagatcgatctggatttcctgtgggaatgcagcccggaagatgagttcgagcacgat
gtgctggcggccgattactggggccatgccccctcggcactggagaatgctgccatcatc
ctgcgcgtgttcggtgccccgatgtatttctacaaaaagggcaagggccgctataaaaaa
gccccggaagaagcactgaaagccgcgctggccggtatcgagcgcaagaagcgcgagcaa
gagcagattgatggctgggtggccgagctgaaggccggtaccctgccggaggccatccgc
agccagttgatgaccttgctgtggaagccggacaagaacacgctcgaattcaaggctttc
gaccaggccgcgcgcgagctgaaccagccgccgctgaaactggcacaaagcgtgggcggt
atcagttcggtgccggactacctgatggccggtttcctgatggagtacttccccaagggc
agcggttttggcaaatatgccccgccgctgctgccggaagaactgccgctctccgaggtg
gcagctttctccattgatgacgccaacaccaccgaaatcgacgatgcgctgtcggtagtc
gacctgccggacggcaacaagcgcgtgggcatccacattgccgcccctacacttggcgtg
ccggtggattcggacatcgaaaaactggtatggggccgcctgtccaccgtgtatttcccc
ggtggcaagatcaccatgttgccagacgacgtggtgcaggcctttaccttgcaggaaggg
caggactgcccggcgctcagcctgtatgtggacgtcacgccggacttcgagccggtggcc
tacgaaagccgcatcgagcgggtgcgcattgcggccaacctgcgtcatgccgagctggaa
cagcagttcaacgaagacaccctgctgaacgacccgggcgtggattacccgttcaagcgc
gagctgacctggctgtggcactttgccaatgcactggaaaaacgccgtggcaagtacgac
cccacccgtccggtgcagatggactacaactttgatgtggtcgatggcaaggtgctgatc
accctgcgcaagcgtggtgcgccgatggacaagctggtgtcggaactgatgattctggcc
aacagcgaatggggccgcatgctggccgaagcggatatcccggccatgtatcgcgcccag
agcatgggcaaggtccgcatgaccacccgccccgagccgcatatcggcttgggcgtggcg
caatatgcctgggccacctcgccgctgcgccgtgccaccgacttcgtcaaccagcgccag
ctcactgccatgattcgtggcgagaagccgcagttcgagcaaggcaatgccatgctgttt
gccctgctgcgcgactttgacaccacctattccgcctatctgggtttccaggacaagctg
gagcacttctggtgcctgcgctggtttacccaggaaggtgtcagcaatgtcaccgccacc
ttcatcaaggaagacctggtgcgtatcgacggtctgccgctgcgggtacgcattccgggc
ttgccggaactggcgcgtggcgaccgtatccagctgagcgtgatccgcatcgacgaactg
atggccgagatcgaattccgctttgtcggcgtggtaggccatgtcgaggctgccagcgag
gaagaagaaggctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (9)   

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