KEGG   Radiobacillus deserti: FN924_11270
Entry
FN924_11270       CDS       T06091                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aqt  Radiobacillus deserti
Pathway
aqt03410  Base excision repair
aqt03430  Mismatch repair
aqt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aqt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    FN924_11270 (recJ)
   03430 Mismatch repair
    FN924_11270 (recJ)
   03440 Homologous recombination
    FN924_11270 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aqt03400]
    FN924_11270 (recJ)
DNA repair and recombination proteins [BR:aqt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     FN924_11270 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     FN924_11270 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      FN924_11270 (recJ)
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 Hpt
Other DBs
NCBI-ProteinID: QDP40714
UniProt: A0A516KH50
Position
complement(2117530..2119872)
AA seq 780 aa
MLQSQANWKFTYNEHQVGFEHNLNISPWTEQLLSQRGVNTEEEAEAFLHPQLTHLHNPGL
LHDIDIAVKRVKQAIHSGEKILVFGDYDADGVSSTSVMIEALKELGATCDFYIPNRFTEG
YGPNEAAFVKAKDEGYTLIITVDTGIAAVYEAEVAKNLGIDLIITDHHEVQETLPDAFAI
VHPKCSDNYPFHELAGVGVAFKFAEHLLGYFPKQLLDLVVIGTIADLVPLVDENRVLAYY
GLQAISHSKRPGLLALKELCKIERDVNEEDIGFLIGPRINAVGRLQDAAMAVDLLLTNDI
EEARELAAFIQELNEERQKIVSDIAKEAQAMVEQETPEANSHVIIVAKEGWNEGVLGIVA
SKLVRLYDRPAIVLSINPTTGKAKGSARSVDAFDLFKNCMAVRDLFTHFGGHAQAAGMTL
DVEQVAPLREALNRMAAEQLSDEDFKQVLRIEASLPIESIQIEFIKEIALLAPFGMGNPK
PLFHVQTKPREVKQIGSTSNHLKVTFEQDSYLLDGVGFGMGALFPRISPQSMLEAVGELS
INEWNGNVKPQLMMKDIAVNEWQLFDYRGSNFWYKQFTSDLENKLAVSFTDNQNMVKLPE
GFDHFTFSELPLSLLEQQTYRHIVLLDLPNRIEDLQAVLGKLNPESIYACYRNDGDRSIS
ILPTREEFKWLYAFLLKRKELKDSEVPKLASFKGWKVEKVQFMIQVFLELQFMNRDQNRI
IPSERPLKKDLSEAPSYQDMEAKLEIESVLYYSSYTELREWLKAQFNTMDPIKEEVTNGL
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgttacaaagccaagcaaactggaaatttacatataatgagcatcaggtaggatttgag
cataacctcaatatttctccttggacagagcaattacttagtcaaagaggcgtaaataca
gaagaggaagcagaggcgtttttacatccacaattaactcacttgcacaatccaggactc
ttacatgatattgacattgctgtcaaacgggttaaacaggcaattcatagtggggaaaag
atattagtatttggtgattacgatgcagacggagtaagttctacttcggtcatgatagaa
gcactaaaagaattaggggcaacatgtgatttttatattcctaatcgtttcacagaaggc
tatggaccgaatgaagcagcttttgtaaaggcaaaagatgagggctatacgcttatcatt
acagtggatacggggattgcagctgtctatgaagcggaagtagcgaaaaacttaggaata
gatttaattattacagatcatcacgaggtacaagaaacgcttccagatgcttttgcgatt
gtacacccaaaatgctccgataactatcctttccatgaattagctggggtaggagttgca
tttaaatttgccgagcatttactcggatattttcctaaacagttacttgaccttgtcgtc
attggaacgattgccgatttggttcccttagtagatgagaatcgggtacttgcgtattac
ggattacaagcgattagtcattctaaacgtccagggcttctagcattaaaagagttgtgt
aagattgaacgggatgtgaatgaagaggatatcggtttcttaattggtccgagaattaac
gcagttgggcggttacaggatgccgctatggcagttgacctgcttttaacaaatgatata
gaagaagctagagagcttgcggcattcattcaggagcttaatgaagaacgacaaaaaatc
gtttcagatattgcaaaagaagcgcaagctatggtggaacaagaaactccagaggctaac
agtcatgtcatcattgtggcgaaagaaggctggaatgaaggagtgcttggtatcgtagca
tctaaactcgttcgtttgtatgatcgaccggccattgtgttatcgataaatccgaccact
ggtaaggcaaaaggatctgcaagaagtgttgatgcgtttgatttgtttaaaaactgtatg
gctgttcgtgatctcttcacccattttggtggacatgcacaagccgctgggatgacactt
gatgtagagcaagttgcgcccttacgagaagcactgaatcggatggcagcagaacaacta
tcggatgaggattttaagcaagtgctgcgtatagaagctagcttgcccattgaatcgatt
caaatagaatttataaaagaaatcgctttgctagcgcctttcggtatgggaaatccgaag
ccattgtttcatgttcaaacaaagcctagagaagtgaaacaaattgggagtacaagcaat
catctaaaagtcacatttgaacaggactcctaccttttagatggagtcggcttcgggatg
ggtgctttatttccgcgaatttctccacaatccatgctggaagcagttggggagctaagc
attaatgagtggaatggtaatgtgaagccacagcttatgatgaaagacattgctgtaaac
gaatggcaactatttgattatcgaggttccaacttctggtataaacaattcacgagtgac
ttggaaaataaacttgcggtatcttttacggataatcagaatatggtcaaacttccagaa
ggctttgatcattttacgttctcagaattacctcttagcttgttagaacaacagacgtat
cgacatattgtgttgctagatttacctaatcgaatagaagatttgcaagctgtgttaggt
aagcttaatccagagtcgatttatgcctgttataggaatgacggtgatcgtagcatttcg
attttaccaactagagaagagtttaagtggttgtatgctttcctgttaaagcgtaaagaa
ctaaaagatagtgaggttcctaaattagcatcctttaaaggttggaaagtggagaaggta
caatttatgatacaagtattcttagaattacaatttatgaatcgagatcaaaaccgtatc
attcccagtgaacgtccacttaaaaaagatttatcagaagcaccatcttatcaagatatg
gaagctaaattagaaatagagtcggtcttgtattattcttcatatactgaattaagagaa
tggctgaaagcacaatttaatacaatggatccgattaaggaggaagtaacaaatggatta
taa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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